Model info
Transcription factorZIC1
ModelZIC1_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
B
Motif rank
0
ConsensusKGGGWGSKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words34
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
HGNC12872
EntrezGene7545
UniProt IDZIC1_HUMAN
UniProt ACQ15915
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.76953
0.0005 5.438345
0.0001 6.676855
GTEx tissue expression atlas ZIC1 expression
ReMap ChIP-seq dataset list ZIC1 datasets
Motifs in JASPAR
PCM
ACGT
011.5714.38717.27610.019
022.9241.9528.3780.0
030.00.97531.3020.975
040.01.9531.3020.0
059.9650.9755.84916.463
063.8990.025.4533.899
071.957.79823.5040.0
081.0832.9248.88220.363
097.17614.7589.1252.193
PWM
ACGT
01-1.323-0.5570.6810.17
02-0.883-1.1791.158-2.35
03-2.35-1.6021.253-1.602
04-2.35-1.1791.253-2.35
050.165-1.602-0.3120.635
06-0.655-2.351.053-0.655
07-1.179-0.0580.976-2.35
08-1.545-0.8830.060.838
09-0.1320.5310.085-1.097