Model info
Transcription factorZic2
ModelZIC2_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
C
Motif rank
0
ConsensusndRhhhCCTGCTGdGhn
Best auROC (human)0.5113559357226009
Best auROC (mouse)0.9867821419287262
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words508
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI106679
EntrezGene
UniProt IDZIC2_MOUSE
UniProt ACQ62520
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.040660000000001
0.0005 9.26671
0.0001 13.90211
GTEx tissue expression atlas Zic2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0124.09.086.09.035.025.019.0101.026.013.038.09.012.013.051.030.0
0218.014.062.03.027.017.07.09.047.026.0113.08.018.08.0119.04.0
0315.050.023.022.013.036.04.012.056.0188.028.029.01.012.08.03.0
0414.047.06.018.022.0117.09.0138.07.040.03.013.05.036.010.015.0
056.025.06.011.065.088.07.080.01.016.00.011.072.060.020.032.0
061.0143.00.00.01.0188.00.00.00.033.00.00.00.0133.01.00.0
070.02.00.00.024.0462.01.010.00.01.00.00.00.00.00.00.0
083.01.00.020.017.084.00.0364.00.00.00.01.00.00.00.010.0
093.00.017.00.023.04.054.04.00.00.00.00.015.05.0374.01.0
100.038.03.00.00.07.00.02.01.0388.038.018.00.03.02.00.0
110.00.00.01.030.02.011.0393.012.01.012.018.00.00.013.07.0
121.00.040.01.01.00.02.00.00.00.036.00.02.00.0416.01.0
132.00.02.00.00.00.00.00.0205.044.097.0148.02.00.00.00.0
140.011.0187.011.03.05.017.019.00.012.078.09.01.05.0112.030.0
150.04.00.00.011.05.00.017.0177.0109.030.078.018.025.04.022.0
1641.036.0102.027.036.039.016.052.04.09.09.012.013.027.033.044.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.26-1.2151.004-1.2150.112-0.22-0.491.165-0.181-0.860.193-1.215-0.938-0.860.485-0.04
02-0.543-0.7880.679-2.234-0.144-0.599-1.454-1.2150.404-0.1811.276-1.328-0.543-1.3281.328-1.975
03-0.7210.465-0.302-0.346-0.860.14-1.975-0.9380.5781.784-0.108-0.074-3.126-0.938-1.328-2.234
04-0.7880.404-1.6-0.543-0.3461.311-1.2151.476-1.4540.244-2.234-0.86-1.770.14-1.114-0.721
05-1.6-0.22-1.6-1.0220.7261.027-1.4540.932-3.126-0.658-4.4-1.0220.8280.646-0.4390.023
06-3.1261.511-4.4-4.4-3.1261.784-4.4-4.4-4.40.054-4.4-4.4-4.41.439-3.126-4.4
07-4.4-2.584-4.4-4.4-0.262.682-3.126-1.114-4.4-3.126-4.4-4.4-4.4-4.4-4.4-4.4
08-2.234-3.126-4.4-0.439-0.5990.981-4.42.444-4.4-4.4-4.4-3.126-4.4-4.4-4.4-1.114
09-2.234-4.4-0.599-4.4-0.302-1.9750.542-1.975-4.4-4.4-4.4-4.4-0.721-1.772.471-3.126
10-4.40.193-2.234-4.4-4.4-1.454-4.4-2.584-3.1262.5080.193-0.543-4.4-2.234-2.584-4.4
11-4.4-4.4-4.4-3.126-0.04-2.584-1.0222.52-0.938-3.126-0.938-0.543-4.4-4.4-0.86-1.454
12-3.126-4.40.244-3.126-3.126-4.4-2.584-4.4-4.4-4.40.14-4.4-2.584-4.42.577-3.126
13-2.584-4.4-2.584-4.4-4.4-4.4-4.4-4.41.8710.3391.1241.545-2.584-4.4-4.4-4.4
14-4.4-1.0221.779-1.022-2.234-1.77-0.599-0.49-4.4-0.9380.907-1.215-3.126-1.771.268-0.04
15-4.4-1.975-4.4-4.4-1.022-1.77-4.4-0.5991.7241.241-0.040.907-0.543-0.22-1.975-0.346
160.2690.141.174-0.1440.140.219-0.6580.504-1.975-1.215-1.215-0.938-0.86-0.1440.0540.339