Model info
Transcription factorZic3
ModelZIC3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusdvvbhCCTGCTGdGn
Best auROC (human)
Best auROC (mouse)0.9434576414115916
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)5
Aligned words170
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI106676
EntrezGene22773
UniProt IDZIC3_MOUSE
UniProt ACQ62521
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.93146
0.0005 4.99536
0.0001 7.18221
GTEx tissue expression atlas Zic3 expression
Motifs in JASPAR
PCM
ACGT
0128.026.077.038.0
0228.039.090.012.0
0337.084.027.021.0
0417.078.021.053.0
0537.064.016.052.0
060.0168.01.00.0
0714.0153.00.02.0
0810.022.00.0137.0
098.010.0148.03.0
100.0155.014.00.0
118.01.02.0158.0
122.05.0162.00.0
1355.05.034.075.0
141.05.0148.015.0
1563.043.024.039.0
PWM
ACGT
01-0.397-0.4670.587-0.103
02-0.397-0.0780.74-1.187
03-0.1290.672-0.431-0.67
04-0.8680.6-0.670.221
05-0.1290.405-0.9240.202
06-3.5251.358-2.948-3.525
07-1.0471.265-3.525-2.585
08-1.35-0.626-3.5251.156
09-1.545-1.351.232-2.319
10-3.5251.278-1.047-3.525
11-1.545-2.948-2.5851.297
12-2.585-1.9361.322-3.525
130.257-1.936-0.210.561
14-2.948-1.9361.232-0.983
150.390.017-0.543-0.078