Model info
Transcription factorZIC4
ModelZIC4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length15
Quality
D
Motif rank
0
ConsensusdMdCMGCGGGGGKYv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words4313
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
HGNC20393
EntrezGene84107
UniProt IDZIC4_HUMAN
UniProt ACQ8N9L1
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.19906
0.0005 1.6902599999999999
0.0001 4.74291
GTEx tissue expression atlas ZIC4 expression
ReMap ChIP-seq dataset list ZIC4 datasets
Motifs in JASPAR
PCM
ACGT
01882.0424.01654.01353.0
02586.52936.5433.5356.5
031752.5319.51563.5677.5
0416.254240.2513.2543.25
052870.5684.5345.5412.5
06948.2533.253329.252.25
073.03821.01.0488.0
08705.00.03604.04.0
090.00.04298.015.0
100.00.04313.00.0
1171.032.03994.0216.0
1224.2530.254026.25232.25
13301.5294.53341.5375.5
14329.25755.25549.252679.25
15983.252130.25687.25512.25
PWM
ACGT
01-0.2-0.930.4270.227
02-0.6071.001-0.908-1.103
030.485-1.2120.371-0.464
04-4.0761.368-4.254-3.171
050.978-0.453-1.134-0.958
06-0.128-3.421.126-5.517
07-5.3571.264-5.856-0.79
08-0.424-6.2471.205-5.178
09-6.247-6.2471.381-4.146
10-6.247-6.2471.385-6.247
11-2.693-3.4561.308-1.6
12-3.714-3.5091.316-1.528
13-1.269-1.2931.13-1.051
14-1.182-0.355-0.6730.909
15-0.0920.68-0.449-0.742