Model info
Transcription factorZNF140
(GeneCards)
ModelZN140_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
C
Motif rank
0
ConsensushvddvnbYWKCAATTCYRCTCMhh
Best auROC (human)0.984
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words450
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF302-like factors {2.3.3.44}
HGNCHGNC:12925
EntrezGeneGeneID:7699
(SSTAR profile)
UniProt IDZN140_HUMAN
UniProt ACP52738
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.5418100000000001
0.0005 2.89111
0.0001 5.75106
GTEx tissue expression atlas ZNF140 expression
ReMap ChIP-seq dataset list ZNF140 datasets
Motifs in JASPAR
PCM
ACGT
0173.091.058.0228.0
02226.079.080.065.0
0378.065.070.0237.0
0480.052.0239.079.0
05256.074.061.059.0
0647.0221.047.0135.0
0739.0267.070.074.0
0865.0271.020.094.0
09292.023.030.0105.0
1036.08.0353.053.0
114.0432.05.09.0
12375.044.08.023.0
13413.08.024.05.0
142.09.01.0438.0
154.02.02.0442.0
165.0439.02.04.0
1731.0309.06.0104.0
18211.010.0225.04.0
1910.0385.021.034.0
206.047.05.0392.0
212.0425.01.022.0
2271.0320.07.052.0
2377.079.036.0258.0
24210.068.058.0114.0
PWM
ACGT
01-0.425-0.209-0.650.7
020.691-0.348-0.335-0.539
03-0.36-0.539-0.4660.738
04-0.335-0.7560.746-0.348
050.815-0.412-0.601-0.633
06-0.8540.669-0.8540.18
07-1.0340.857-0.466-0.412
08-0.5390.871-1.667-0.177
090.946-1.537-1.286-0.068
10-1.111-2.4821.134-0.738
11-3.0271.336-2.86-2.382
121.195-0.918-2.482-1.537
131.291-2.482-1.497-2.86
14-3.476-2.382-3.8091.349
15-3.027-3.476-3.4761.358
16-2.861.352-3.476-3.027
17-1.2541.002-2.718-0.077
180.623-2.2920.686-3.027
19-2.2921.221-1.622-1.166
20-2.718-0.854-2.861.239
21-3.4761.319-3.809-1.578
22-0.4521.037-2.593-0.756
23-0.373-0.348-1.1110.822
240.618-0.495-0.650.013