Model info
Transcription factorZnf143
ModelZN143_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusdGShYbMTGGGAvdTGTAGTYY
Best auROC (human)0.9824874027316803
Best auROC (mouse)0.9789135498903275
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)9
Aligned words463
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyZNF76-like factors{2.3.3.28}
MGI1277969
EntrezGene20841
UniProt IDZN143_MOUSE
UniProt ACO70230
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.36449
0.0005 1.0963600000000002
0.0001 4.21746
GTEx tissue expression atlas Znf143 expression
Motifs in JASPAR
PCM
ACGT
0178.027.0232.0126.0
0214.012.0421.016.0
0342.0296.097.028.0
04210.0181.025.047.0
0513.095.033.0322.0
0620.096.0204.0143.0
0755.0335.036.037.0
085.077.011.0370.0
096.03.0454.00.0
102.02.0454.05.0
1113.01.0443.06.0
12407.014.027.015.0
13223.045.0153.042.0
14173.041.050.0199.0
1514.043.024.0382.0
1610.05.0447.01.0
1729.020.035.0379.0
18421.03.035.04.0
195.06.0446.06.0
203.012.017.0431.0
2110.0225.019.0209.0
2218.0263.025.0157.0
PWM
ACGT
01-0.388-1.4130.6890.084
02-2.022-2.1591.282-1.9
03-0.9910.931-0.174-1.379
040.590.442-1.486-0.882
05-2.088-0.195-1.2231.015
06-1.695-0.1840.5610.209
07-0.731.054-1.139-1.113
08-2.888-0.401-2.2361.153
09-2.745-3.2531.357-4.336
10-3.502-3.5021.357-2.888
11-2.088-3.8351.332-2.745
121.248-2.022-1.413-1.959
130.649-0.9240.276-0.991
140.398-1.014-0.8220.536
15-2.022-0.968-1.5251.185
16-2.319-2.8881.341-3.835
17-1.346-1.695-1.1661.177
181.282-3.253-1.166-3.054
19-2.888-2.7451.339-2.745
20-3.253-2.159-1.8451.305
21-2.3190.658-1.7420.585
22-1.7920.813-1.4860.301