Model info
| Transcription factor | Znf148 | ||||||||
| Model | ZN148_MOUSE.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dSvKbGGGGGhGGGR | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 34 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF148-like factors {2.3.3.13} | ||||||||
| MGI | MGI:1332234 | ||||||||
| EntrezGene | GeneID:22661 (SSTAR profile) | ||||||||
| UniProt ID | ZN148_MOUSE | ||||||||
| UniProt AC | Q61624 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Znf148 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 5.309 | 3.958 | 16.11 | 8.623 |
| 02 | 2.823 | 7.365 | 19.884 | 3.928 |
| 03 | 7.61 | 7.242 | 14.729 | 4.419 |
| 04 | 3.314 | 3.437 | 20.13 | 7.119 |
| 05 | 5.523 | 5.769 | 8.592 | 14.116 |
| 06 | 0.0 | 3.437 | 29.458 | 1.105 |
| 07 | 3.069 | 0.0 | 30.931 | 0.0 |
| 08 | 0.0 | 0.0 | 34.0 | 0.0 |
| 09 | 1.596 | 0.0 | 30.563 | 1.841 |
| 10 | 0.0 | 0.0 | 34.0 | 0.0 |
| 11 | 16.325 | 7.365 | 3.928 | 6.383 |
| 12 | 7.119 | 0.0 | 26.267 | 0.614 |
| 13 | 1.105 | 0.982 | 31.913 | 0.0 |
| 14 | 6.996 | 0.0 | 26.39 | 0.614 |
| 15 | 3.958 | 3.468 | 24.702 | 1.872 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.416 | -0.662 | 0.594 | 0.013 |
| 02 | -0.929 | -0.129 | 0.795 | -0.668 |
| 03 | -0.1 | -0.144 | 0.509 | -0.571 |
| 04 | -0.805 | -0.776 | 0.806 | -0.159 |
| 05 | -0.382 | -0.344 | 0.01 | 0.469 |
| 06 | -2.365 | -0.776 | 1.174 | -1.552 |
| 07 | -0.865 | -2.365 | 1.221 | -2.365 |
| 08 | -2.365 | -2.365 | 1.313 | -2.365 |
| 09 | -1.332 | -2.365 | 1.209 | -1.237 |
| 10 | -2.365 | -2.365 | 1.313 | -2.365 |
| 11 | 0.607 | -0.129 | -0.668 | -0.256 |
| 12 | -0.159 | -2.365 | 1.063 | -1.836 |
| 13 | -1.552 | -1.616 | 1.252 | -2.365 |
| 14 | -0.175 | -2.365 | 1.067 | -1.836 |
| 15 | -0.662 | -0.769 | 1.003 | -1.226 |