Transcription factor | Znf335 | ||||||||
Model | ZN335_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 25 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndRGvYKbCYnvnRvdvYGCCTGWn | ||||||||
Best auROC (human) | 0.894 | ||||||||
Best auROC (mouse) | 0.987 | ||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | 4 | ||||||||
Aligned words | 114 | ||||||||
TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
TF subfamily | unclassified {2.3.4.0} | ||||||||
MGI | MGI:2682313 | ||||||||
EntrezGene | GeneID:329559 (SSTAR profile) | ||||||||
UniProt ID | ZN335_MOUSE | ||||||||
UniProt AC | A2A5K6 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Znf335 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 6.0 | 3.0 | 8.0 | 5.0 | 1.0 | 2.0 | 11.0 | 7.0 | 4.0 | 6.0 | 23.0 | 8.0 | 4.0 | 1.0 | 17.0 | 8.0 |
02 | 2.0 | 0.0 | 10.0 | 3.0 | 2.0 | 1.0 | 9.0 | 0.0 | 9.0 | 4.0 | 41.0 | 5.0 | 12.0 | 2.0 | 10.0 | 4.0 |
03 | 2.0 | 1.0 | 21.0 | 1.0 | 1.0 | 1.0 | 5.0 | 0.0 | 7.0 | 4.0 | 57.0 | 2.0 | 3.0 | 0.0 | 9.0 | 0.0 |
04 | 1.0 | 2.0 | 10.0 | 0.0 | 1.0 | 1.0 | 1.0 | 3.0 | 17.0 | 36.0 | 30.0 | 9.0 | 0.0 | 2.0 | 1.0 | 0.0 |
05 | 1.0 | 8.0 | 5.0 | 5.0 | 1.0 | 4.0 | 1.0 | 35.0 | 0.0 | 19.0 | 7.0 | 16.0 | 1.0 | 0.0 | 8.0 | 3.0 |
06 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 16.0 | 14.0 | 0.0 | 9.0 | 2.0 | 10.0 | 2.0 | 0.0 | 54.0 | 3.0 |
07 | 0.0 | 0.0 | 2.0 | 1.0 | 0.0 | 4.0 | 5.0 | 0.0 | 5.0 | 16.0 | 8.0 | 45.0 | 0.0 | 3.0 | 22.0 | 3.0 |
08 | 0.0 | 5.0 | 0.0 | 0.0 | 1.0 | 22.0 | 0.0 | 0.0 | 4.0 | 17.0 | 2.0 | 14.0 | 1.0 | 46.0 | 0.0 | 2.0 |
09 | 0.0 | 4.0 | 1.0 | 1.0 | 4.0 | 65.0 | 0.0 | 21.0 | 0.0 | 0.0 | 0.0 | 2.0 | 2.0 | 12.0 | 0.0 | 2.0 |
10 | 1.0 | 2.0 | 1.0 | 2.0 | 16.0 | 29.0 | 18.0 | 18.0 | 1.0 | 0.0 | 0.0 | 0.0 | 13.0 | 2.0 | 5.0 | 6.0 |
11 | 9.0 | 7.0 | 13.0 | 2.0 | 15.0 | 2.0 | 12.0 | 4.0 | 4.0 | 13.0 | 2.0 | 5.0 | 6.0 | 4.0 | 13.0 | 3.0 |
12 | 12.0 | 9.0 | 10.0 | 3.0 | 9.0 | 2.0 | 10.0 | 5.0 | 12.0 | 9.0 | 11.0 | 8.0 | 5.0 | 2.0 | 4.0 | 3.0 |
13 | 7.0 | 2.0 | 27.0 | 2.0 | 6.0 | 2.0 | 10.0 | 4.0 | 7.0 | 8.0 | 19.0 | 1.0 | 3.0 | 2.0 | 11.0 | 3.0 |
14 | 9.0 | 5.0 | 7.0 | 2.0 | 4.0 | 3.0 | 4.0 | 3.0 | 20.0 | 34.0 | 4.0 | 9.0 | 1.0 | 3.0 | 3.0 | 3.0 |
15 | 4.0 | 1.0 | 16.0 | 13.0 | 15.0 | 0.0 | 24.0 | 6.0 | 3.0 | 2.0 | 5.0 | 8.0 | 6.0 | 2.0 | 7.0 | 2.0 |
16 | 6.0 | 7.0 | 12.0 | 3.0 | 3.0 | 0.0 | 2.0 | 0.0 | 16.0 | 19.0 | 13.0 | 4.0 | 13.0 | 1.0 | 13.0 | 2.0 |
17 | 4.0 | 6.0 | 1.0 | 27.0 | 4.0 | 7.0 | 0.0 | 16.0 | 3.0 | 16.0 | 1.0 | 20.0 | 1.0 | 1.0 | 0.0 | 7.0 |
18 | 1.0 | 0.0 | 11.0 | 0.0 | 1.0 | 0.0 | 28.0 | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 67.0 | 3.0 |
19 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 103.0 | 1.0 | 2.0 | 1.0 | 2.0 | 1.0 | 0.0 |
20 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 | 105.0 | 0.0 | 0.0 | 1.0 | 2.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
21 | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 | 2.0 | 7.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 |
22 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 | 0.0 | 6.0 | 1.0 | 2.0 | 2.0 | 91.0 | 7.0 |
23 | 3.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 61.0 | 12.0 | 5.0 | 23.0 | 5.0 | 1.0 | 0.0 | 2.0 |
24 | 18.0 | 20.0 | 13.0 | 19.0 | 3.0 | 2.0 | 1.0 | 7.0 | 0.0 | 6.0 | 0.0 | 0.0 | 8.0 | 9.0 | 4.0 | 4.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.164 | -0.812 | 0.111 | -0.337 | -1.745 | -1.173 | 0.42 | -0.017 | -0.547 | -0.164 | 1.144 | 0.111 | -0.547 | -1.745 | 0.846 | 0.111 |
02 | -1.173 | -3.222 | 0.327 | -0.812 | -1.173 | -1.745 | 0.225 | -3.222 | 0.225 | -0.547 | 1.716 | -0.337 | 0.505 | -1.173 | 0.327 | -0.547 |
03 | -1.173 | -1.745 | 1.054 | -1.745 | -1.745 | -1.745 | -0.337 | -3.222 | -0.017 | -0.547 | 2.044 | -1.173 | -0.812 | -3.222 | 0.225 | -3.222 |
04 | -1.745 | -1.173 | 0.327 | -3.222 | -1.745 | -1.745 | -1.745 | -0.812 | 0.846 | 1.587 | 1.407 | 0.225 | -3.222 | -1.173 | -1.745 | -3.222 |
05 | -1.745 | 0.111 | -0.337 | -0.337 | -1.745 | -0.547 | -1.745 | 1.559 | -3.222 | 0.956 | -0.017 | 0.787 | -1.745 | -3.222 | 0.111 | -0.812 |
06 | -3.222 | -3.222 | -1.173 | -1.745 | -1.745 | -3.222 | 0.787 | 0.656 | -3.222 | 0.225 | -1.173 | 0.327 | -1.173 | -3.222 | 1.99 | -0.812 |
07 | -3.222 | -3.222 | -1.173 | -1.745 | -3.222 | -0.547 | -0.337 | -3.222 | -0.337 | 0.787 | 0.111 | 1.809 | -3.222 | -0.812 | 1.1 | -0.812 |
08 | -3.222 | -0.337 | -3.222 | -3.222 | -1.745 | 1.1 | -3.222 | -3.222 | -0.547 | 0.846 | -1.173 | 0.656 | -1.745 | 1.831 | -3.222 | -1.173 |
09 | -3.222 | -0.547 | -1.745 | -1.745 | -0.547 | 2.175 | -3.222 | 1.054 | -3.222 | -3.222 | -3.222 | -1.173 | -1.173 | 0.505 | -3.222 | -1.173 |
10 | -1.745 | -1.173 | -1.745 | -1.173 | 0.787 | 1.373 | 0.902 | 0.902 | -1.745 | -3.222 | -3.222 | -3.222 | 0.583 | -1.173 | -0.337 | -0.164 |
11 | 0.225 | -0.017 | 0.583 | -1.173 | 0.723 | -1.173 | 0.505 | -0.547 | -0.547 | 0.583 | -1.173 | -0.337 | -0.164 | -0.547 | 0.583 | -0.812 |
12 | 0.505 | 0.225 | 0.327 | -0.812 | 0.225 | -1.173 | 0.327 | -0.337 | 0.505 | 0.225 | 0.42 | 0.111 | -0.337 | -1.173 | -0.547 | -0.812 |
13 | -0.017 | -1.173 | 1.302 | -1.173 | -0.164 | -1.173 | 0.327 | -0.547 | -0.017 | 0.111 | 0.956 | -1.745 | -0.812 | -1.173 | 0.42 | -0.812 |
14 | 0.225 | -0.337 | -0.017 | -1.173 | -0.547 | -0.812 | -0.547 | -0.812 | 1.006 | 1.531 | -0.547 | 0.225 | -1.745 | -0.812 | -0.812 | -0.812 |
15 | -0.547 | -1.745 | 0.787 | 0.583 | 0.723 | -3.222 | 1.186 | -0.164 | -0.812 | -1.173 | -0.337 | 0.111 | -0.164 | -1.173 | -0.017 | -1.173 |
16 | -0.164 | -0.017 | 0.505 | -0.812 | -0.812 | -3.222 | -1.173 | -3.222 | 0.787 | 0.956 | 0.583 | -0.547 | 0.583 | -1.745 | 0.583 | -1.173 |
17 | -0.547 | -0.164 | -1.745 | 1.302 | -0.547 | -0.017 | -3.222 | 0.787 | -0.812 | 0.787 | -1.745 | 1.006 | -1.745 | -1.745 | -3.222 | -0.017 |
18 | -1.745 | -3.222 | 0.42 | -3.222 | -1.745 | -3.222 | 1.338 | -1.745 | -3.222 | -3.222 | -1.173 | -3.222 | -3.222 | -3.222 | 2.205 | -0.812 |
19 | -3.222 | -1.745 | -1.745 | -3.222 | -3.222 | -3.222 | -3.222 | -3.222 | -1.173 | 2.633 | -1.745 | -1.173 | -1.745 | -1.173 | -1.745 | -3.222 |
20 | -3.222 | -1.173 | -3.222 | -1.745 | -1.745 | 2.652 | -3.222 | -3.222 | -1.745 | -1.173 | -3.222 | -3.222 | -3.222 | -1.745 | -3.222 | -1.745 |
21 | -1.745 | -3.222 | -1.745 | -3.222 | -1.745 | -1.173 | -0.017 | 2.604 | -3.222 | -3.222 | -3.222 | -3.222 | -3.222 | -3.222 | -3.222 | -1.173 |
22 | -3.222 | -3.222 | -1.173 | -3.222 | -3.222 | -3.222 | -1.173 | -3.222 | -1.745 | -3.222 | -0.164 | -1.745 | -1.173 | -1.173 | 2.51 | -0.017 |
23 | -0.812 | -3.222 | -3.222 | -3.222 | -1.745 | -3.222 | -1.745 | -3.222 | 2.111 | 0.505 | -0.337 | 1.144 | -0.337 | -1.745 | -3.222 | -1.173 |
24 | 0.902 | 1.006 | 0.583 | 0.956 | -0.812 | -1.173 | -1.745 | -0.017 | -3.222 | -0.164 | -3.222 | -3.222 | 0.111 | 0.225 | -0.547 | -0.547 |