Model info
Transcription factorZNF449
ModelZN449_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusdGGYTGGGCWb
Best auROC (human)0.9379931699354697
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyunclassified{2.3.3.0}
HGNC21039
EntrezGene203523
UniProt IDZN449_HUMAN
UniProt ACQ6P9G9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.1812249999999995
0.0005 5.255889999999999
0.0001 7.483560000000001
GTEx tissue expression atlas ZNF449 expression
ReMap ChIP-seq dataset list ZNF449 datasets
Motifs in JASPAR
PCM
ACGT
0187.070.097.0246.0
0228.05.0430.037.0
0326.09.0442.023.0
0420.0141.03.0336.0
0518.06.024.0452.0
061.00.0497.02.0
075.01.0491.03.0
0823.056.0410.011.0
0914.0472.04.010.0
1059.017.029.0395.0
1112.0139.0130.0219.0
PWM
ACGT
01-0.357-0.57-0.250.671
02-1.454-2.9611.227-1.189
03-1.525-2.4841.254-1.64
04-1.770.119-3.3250.981
05-1.868-2.819-1.61.276
06-3.903-4.41.371-3.573
07-2.961-3.9031.359-3.325
08-1.64-0.7881.179-2.311
09-2.0961.32-3.126-2.394
10-0.737-1.92-1.4211.142
11-2.2340.1050.0390.555