Model info
Transcription factorZNF490
(GeneCards)
ModelZN490_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
C
Motif rank
0
ConsensusTRdGTYTCTTGWAGRCAGCAKAYM
Best auROC (human)0.989
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words430
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF763-like factors {2.3.3.33}
HGNCHGNC:23705
EntrezGeneGeneID:57474
(SSTAR profile)
UniProt IDZN490_HUMAN
UniProt ACQ9ULM2
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -7.5209399999999995
0.0005 -5.51344
0.0001 -1.21944
GTEx tissue expression atlas ZNF490 expression
ReMap ChIP-seq dataset list ZNF490 datasets
Motifs in JASPAR
PCM
ACGT
0115.024.013.0378.0
0265.08.0333.024.0
03146.05.0174.0105.0
0418.05.0403.04.0
052.07.013.0408.0
068.0271.04.0147.0
071.04.02.0423.0
083.0425.02.00.0
091.022.00.0407.0
101.03.06.0420.0
114.02.0422.02.0
12213.011.05.0201.0
13416.02.08.04.0
1440.04.0365.021.0
15209.01.0219.01.0
162.0428.00.00.0
17428.00.02.00.0
1893.00.0337.00.0
192.0427.01.00.0
20430.00.00.00.0
2120.034.0127.0249.0
22418.01.010.01.0
2320.0182.03.0225.0
24158.0228.08.036.0
PWM
ACGT
01-1.887-1.452-2.0161.247
02-0.494-2.4391.121-1.452
030.302-2.8170.476-0.023
04-1.72-2.8171.311-2.984
05-3.434-2.55-2.0161.323
06-2.4390.916-2.9840.309
07-3.769-2.984-3.4341.359
08-3.1841.364-3.434-4.275
09-3.769-1.534-4.2751.321
10-3.769-3.184-2.6741.352
11-2.984-3.4341.357-3.434
120.677-2.164-2.8170.619
131.343-3.434-2.439-2.984
14-0.965-2.9841.213-1.577
150.658-3.7690.704-3.769
16-3.4341.371-4.275-4.275
171.371-4.275-3.434-4.275
18-0.143-4.2751.133-4.275
19-3.4341.369-3.769-4.275
201.376-4.275-4.275-4.275
21-1.623-1.1220.1650.832
221.348-3.769-2.248-3.769
23-1.6230.521-3.1840.731
240.3810.744-2.439-1.067