Model info
Transcription factorZNF549
ModelZN549_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
C
Motif rank
0
ConsensusWdYYAKSRRYhGGRCAGCMb
Best auROC (human)0.9483578320674002
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyunclassified{2.3.3.0}
HGNC26632
EntrezGene256051
UniProt IDZN549_HUMAN
UniProt ACQ6P9A3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.2496599999999995
0.0005 4.400309999999999
0.0001 6.8380600000000005
GTEx tissue expression atlas ZNF549 expression
ReMap ChIP-seq dataset list ZNF549 datasets
Motifs in JASPAR
PCM
ACGT
01289.2530.2531.25149.25
0267.2559.2595.25278.25
0327.2567.2533.25372.25
0422.25367.257.25103.25
05478.255.256.2510.25
0636.2517.25118.25328.25
0729.2591.25308.2571.25
08311.2562.2588.2538.25
09361.2516.2590.2532.25
1052.25168.2517.25262.25
1194.25119.2517.25269.25
1291.251.25392.2515.25
1312.256.25475.256.25
1475.2537.25382.255.25
1527.25462.253.257.25
16420.2510.2526.2543.25
1713.2536.25442.258.25
189.0420.049.022.0
19313.097.029.061.0
2070.0227.077.0126.0
PWM
ACGT
010.832-1.381-1.350.175
02-0.609-0.733-0.2680.793
03-1.48-0.609-1.2911.083
04-1.6711.07-2.665-0.189
051.333-2.923-2.786-2.372
06-1.208-1.907-0.0550.958
07-1.413-0.310.895-0.553
080.905-0.685-0.343-1.157
091.053-1.961-0.321-1.32
10-0.8550.294-1.9070.735
11-0.278-0.046-1.9070.761
12-0.31-3.811.135-2.019
13-2.216-2.7861.326-2.786
14-0.499-1.1821.109-2.923
15-1.481.299-3.271-2.665
161.204-2.372-1.515-1.038
17-2.146-1.2081.255-2.558
18-2.4841.203-0.918-1.681
190.91-0.25-1.421-0.705
20-0.570.591-0.4770.008