Model info
Transcription factorZNF652
ModelZN652_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnRdKGGTTAAh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words236
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyZNF652-like factors{2.3.3.29}
HGNC29147
EntrezGene22834
UniProt IDZN652_HUMAN
UniProt ACQ9Y2D9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.250515
0.0005 6.109395
0.0001 7.9239999999999995
GTEx tissue expression atlas ZNF652 expression
ReMap ChIP-seq dataset list ZNF652 datasets
Motifs in JASPAR
PCM
ACGT
01140.523.535.535.5
02173.016.024.022.0
03118.519.569.527.5
0412.7511.75187.7522.75
0524.00.0204.07.0
066.02.0221.06.0
075.08.05.0217.0
0811.254.2510.25209.25
09213.255.257.259.25
10204.759.759.7510.75
1161.044.029.0101.0
PWM
ACGT
010.859-0.883-0.489-0.489
021.065-1.242-0.863-0.945
030.69-1.0580.165-0.734
04-1.449-1.5231.146-0.913
05-0.863-3.7851.229-1.972
06-2.1-2.8831.308-2.1
07-2.245-1.859-2.2451.29
08-1.561-2.371-1.6441.254
091.273-2.207-1.943-1.734
101.232-1.688-1.688-1.602
110.037-0.282-0.6830.532