Model info
Transcription factorZNF18
ModelZNF18_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusRGTGTGARYhbd
Best auROC (human)0.9519394925030213
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyunclassified{2.3.3.0}
HGNC12969
EntrezGene7566
UniProt IDZNF18_HUMAN
UniProt ACP17022
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9070099999999996
0.0005 4.99155
0.0001 7.246700000000001
GTEx tissue expression atlas ZNF18 expression
ReMap ChIP-seq dataset list ZNF18 datasets
Motifs in JASPAR
PCM
ACGT
01147.07.0307.039.0
022.04.0494.00.0
039.00.05.0486.0
0411.03.0485.01.0
0528.01.044.0427.0
063.07.0490.00.0
07476.014.03.07.0
08393.08.065.034.0
0913.0292.084.0111.0
10125.0116.048.0211.0
1145.0134.0241.080.0
12104.089.0206.0101.0
PWM
ACGT
010.16-2.6940.891-1.138
02-3.573-3.1261.365-4.4
03-2.484-4.4-2.9611.349
04-2.311-3.3251.347-3.903
05-1.454-3.903-1.0221.22
06-3.325-2.6941.357-4.4
071.328-2.096-3.325-2.694
081.137-2.584-0.643-1.27
09-2.1630.841-0.392-0.117
100.0-0.074-0.9380.519
11-1.00.0690.651-0.439
12-0.181-0.3350.495-0.21