Model info
| Transcription factor | ZNF85 (GeneCards) | ||||||||
| Model | ZNF85_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 20 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RdWRRMRWvKGMWGbAATCW | ||||||||
| Best auROC (human) | 0.899 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:13160 | ||||||||
| EntrezGene | GeneID:7639 (SSTAR profile) | ||||||||
| UniProt ID | ZNF85_HUMAN | ||||||||
| UniProt AC | Q03923 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF85 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF85 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 312.0 | 58.0 | 69.0 | 61.0 |
| 02 | 132.0 | 64.0 | 81.0 | 223.0 |
| 03 | 297.0 | 50.0 | 52.0 | 101.0 |
| 04 | 86.0 | 51.0 | 327.0 | 36.0 |
| 05 | 311.0 | 50.0 | 93.0 | 46.0 |
| 06 | 313.0 | 99.0 | 55.0 | 33.0 |
| 07 | 277.0 | 44.0 | 152.0 | 27.0 |
| 08 | 270.0 | 29.0 | 51.0 | 150.0 |
| 09 | 76.0 | 279.0 | 86.0 | 59.0 |
| 10 | 73.0 | 17.0 | 74.0 | 336.0 |
| 11 | 95.0 | 2.0 | 401.0 | 2.0 |
| 12 | 310.0 | 164.0 | 16.0 | 10.0 |
| 13 | 254.0 | 15.0 | 29.0 | 202.0 |
| 14 | 15.0 | 3.0 | 477.0 | 5.0 |
| 15 | 43.0 | 46.0 | 188.0 | 223.0 |
| 16 | 487.0 | 6.0 | 4.0 | 3.0 |
| 17 | 433.0 | 48.0 | 1.0 | 18.0 |
| 18 | 5.0 | 23.0 | 11.0 | 461.0 |
| 19 | 19.0 | 457.0 | 8.0 | 16.0 |
| 20 | 87.0 | 70.0 | 11.0 | 332.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.907 | -0.754 | -0.584 | -0.705 |
| 02 | 0.054 | -0.658 | -0.427 | 0.573 |
| 03 | 0.858 | -0.898 | -0.86 | -0.21 |
| 04 | -0.368 | -0.879 | 0.954 | -1.215 |
| 05 | 0.904 | -0.898 | -0.291 | -0.979 |
| 06 | 0.91 | -0.23 | -0.805 | -1.298 |
| 07 | 0.789 | -1.022 | 0.193 | -1.489 |
| 08 | 0.763 | -1.421 | -0.879 | 0.18 |
| 09 | -0.49 | 0.796 | -0.368 | -0.737 |
| 10 | -0.529 | -1.92 | -0.516 | 0.981 |
| 11 | -0.271 | -3.573 | 1.157 | -3.573 |
| 12 | 0.901 | 0.269 | -1.975 | -2.394 |
| 13 | 0.703 | -2.034 | -1.421 | 0.475 |
| 14 | -2.034 | -3.325 | 1.33 | -2.961 |
| 15 | -1.044 | -0.979 | 0.404 | 0.573 |
| 16 | 1.351 | -2.819 | -3.126 | -3.325 |
| 17 | 1.234 | -0.938 | -3.903 | -1.868 |
| 18 | -2.961 | -1.64 | -2.311 | 1.296 |
| 19 | -1.818 | 1.287 | -2.584 | -1.975 |
| 20 | -0.357 | -0.57 | -2.311 | 0.969 |