Model info
Transcription factorZSCAN4
ModelZSCA4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensusAGKGTGTGCAhh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1158
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyZSCAN5-like zinc finger factors{2.3.3.5}
HGNC23709
EntrezGene201516
UniProt IDZSCA4_HUMAN
UniProt ACQ8NAM6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -3.57081
0.0005 -0.5507599999999999
0.0001 1.82079
GTEx tissue expression atlas ZSCAN4 expression
ReMap ChIP-seq dataset list ZSCAN4 datasets
Motifs in JASPAR
PCM
ACGT
011156.00.00.00.0
020.00.01156.00.0
030.0141.0188.0827.0
040.00.01156.00.0
050.00.00.01156.0
060.00.01156.00.0
070.00.00.01156.0
080.00.01156.00.0
090.01148.00.08.0
101144.750.758.751.75
11204.5538.5194.5218.5
12275.5213.5105.5561.5
PWM
ACGT
011.382-5.105-5.105-5.105
02-5.105-5.1051.382-5.105
03-5.105-0.711-0.4271.047
04-5.105-5.1051.382-5.105
05-5.105-5.105-5.1051.382
06-5.105-5.1051.382-5.105
07-5.105-5.105-5.1051.382
08-5.105-5.1051.382-5.105
09-5.1051.375-5.105-3.394
101.372-4.751-3.32-4.416
11-0.3430.62-0.393-0.278
12-0.048-0.301-0.9970.661