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Model info
Transcription factorTFAP2A
(GeneCards)
ModelAP2A_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnhdSCCYGRGGSndn
Best auROC (human)0.961
Best auROC (mouse)0.956
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)13
Aligned words500
TF familyAP-2 {1.3.1}
TF subfamilyAP-2alpha {1.3.1.0.1}
HGNCHGNC:11742
EntrezGeneGeneID:7020
(SSTAR profile)
UniProt IDAP2A_HUMAN
UniProt ACP05549
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.579060000000001
0.0005 9.86916
0.0001 14.441460000000001
GTEx tissue expression atlas TFAP2A expression
ReMap ChIP-seq dataset list TFAP2A datasets
Motifs in JASPAR
MA0003.1 (TFAP2A; Homo sapiens)
MA0003.2 (TFAP2A; Homo sapiens)
MA0003.3 (TFAP2A; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.023.028.067.030.019.01.081.020.024.020.054.03.017.018.060.0
0219.07.038.021.025.017.016.025.016.09.028.014.048.035.0126.053.0
032.041.062.03.03.030.032.03.03.0161.039.05.03.027.079.04.0
042.09.00.00.02.0256.01.00.00.0212.00.00.01.013.00.01.0
051.03.01.00.02.0466.00.022.00.01.00.00.01.00.00.00.0
060.01.01.02.025.0105.012.0328.00.00.00.01.05.04.05.08.0
070.00.028.02.00.00.093.017.00.00.016.02.00.00.0293.046.0
080.00.00.00.00.00.00.00.0214.039.0172.05.037.01.024.05.0
0926.00.0225.00.05.00.034.01.037.00.0159.00.03.00.07.00.0
100.01.070.00.00.00.00.00.00.06.0415.04.00.00.00.01.0
110.00.00.00.03.02.02.00.017.0266.0198.04.01.01.03.00.0
122.015.01.03.094.053.043.079.016.0120.041.026.00.00.01.03.0
1363.07.024.018.0116.029.07.036.028.020.022.016.050.08.037.016.0
1465.037.070.085.09.014.011.030.020.011.021.038.015.016.024.031.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.029-0.296-0.1020.762-0.034-0.484-3.1210.951-0.433-0.254-0.4330.548-2.228-0.593-0.5370.652
02-0.484-1.4490.199-0.386-0.214-0.593-0.652-0.214-0.652-1.209-0.102-0.7820.4310.1181.3910.529
03-2.5780.2750.685-2.228-2.228-0.0340.029-2.228-2.2281.6350.225-1.764-2.228-0.1380.926-1.97
04-2.578-1.209-4.395-4.395-2.5782.098-3.121-4.395-4.3951.91-4.395-4.395-3.121-0.854-4.395-3.121
05-3.121-2.228-3.121-4.395-2.5782.697-4.395-0.34-4.395-3.121-4.395-4.395-3.121-4.395-4.395-4.395
06-4.395-3.121-3.121-2.578-0.2141.209-0.9322.346-4.395-4.395-4.395-3.121-1.764-1.97-1.764-1.322
07-4.395-4.395-0.102-2.578-4.395-4.3951.088-0.593-4.395-4.395-0.652-2.578-4.395-4.3952.2330.389
08-4.395-4.395-4.395-4.395-4.395-4.395-4.395-4.3951.9190.2251.701-1.7640.173-3.121-0.254-1.764
09-0.176-4.3951.969-4.395-1.764-4.3950.089-3.1210.173-4.3951.623-4.395-2.228-4.395-1.449-4.395
10-4.395-3.1210.806-4.395-4.395-4.395-4.395-4.395-4.395-1.5942.581-1.97-4.395-4.395-4.395-3.121
11-4.395-4.395-4.395-4.395-2.228-2.578-2.578-4.395-0.5932.1371.842-1.97-3.121-3.121-2.228-4.395
12-2.578-0.715-3.121-2.2281.0990.5290.3220.926-0.6521.3420.275-0.176-4.395-4.395-3.121-2.228
130.701-1.449-0.254-0.5371.309-0.068-1.4490.146-0.102-0.433-0.34-0.6520.471-1.3220.173-0.652
140.7320.1730.8060.999-1.209-0.782-1.016-0.034-0.433-1.016-0.3860.199-0.715-0.652-0.254-0.002