Model info
| Transcription factor | Atf7 | ||||||||
| Model | ATF7_MOUSE.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdTGAbGWMAb | ||||||||
| Best auROC (human) | 0.596 | ||||||||
| Best auROC (mouse) | 0.773 | ||||||||
| Peak sets in benchmark (human) | 1 | ||||||||
| Peak sets in benchmark (mouse) | 2 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | ATF-2-like factors {1.1.1.3} | ||||||||
| MGI | MGI:2443472 | ||||||||
| EntrezGene | GeneID:223922 (SSTAR profile) | ||||||||
| UniProt ID | ATF7_MOUSE | ||||||||
| UniProt AC | Q8R0S1 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Atf7 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 173.0 | 47.0 | 249.0 | 31.0 |
| 02 | 221.0 | 41.0 | 196.0 | 42.0 |
| 03 | 33.0 | 0.0 | 8.0 | 459.0 |
| 04 | 6.0 | 15.0 | 451.0 | 28.0 |
| 05 | 430.0 | 21.0 | 20.0 | 29.0 |
| 06 | 31.0 | 167.0 | 126.0 | 176.0 |
| 07 | 4.0 | 22.0 | 459.0 | 15.0 |
| 08 | 93.0 | 39.0 | 18.0 | 350.0 |
| 09 | 112.0 | 361.0 | 19.0 | 8.0 |
| 10 | 474.0 | 5.0 | 8.0 | 13.0 |
| 11 | 17.0 | 154.0 | 127.0 | 202.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.322 | -0.958 | 0.683 | -1.358 |
| 02 | 0.565 | -1.09 | 0.445 | -1.067 |
| 03 | -1.298 | -4.4 | -2.584 | 1.292 |
| 04 | -2.819 | -2.034 | 1.274 | -1.454 |
| 05 | 1.227 | -1.725 | -1.77 | -1.421 |
| 06 | -1.358 | 0.287 | 0.008 | 0.339 |
| 07 | -3.126 | -1.681 | 1.292 | -2.034 |
| 08 | -0.291 | -1.138 | -1.868 | 1.022 |
| 09 | -0.108 | 1.053 | -1.818 | -2.584 |
| 10 | 1.324 | -2.961 | -2.584 | -2.163 |
| 11 | -1.92 | 0.206 | 0.016 | 0.475 |