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Model info
Transcription factorATOH1
(GeneCards)
ModelATOH1_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusndnRRCAGMTGSn
Best auROC (human)0.788
Best auROC (mouse)0.996
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)4
Aligned words501
TF familyTal-related factors {1.2.3}
TF subfamilyNeurogenin / Atonal-like factors {1.2.3.4}
HGNCHGNC:797
EntrezGeneGeneID:474
(SSTAR profile)
UniProt IDATOH1_HUMAN
UniProt ACQ92858
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.027465
0.0005 9.713135
0.0001 15.098135
GTEx tissue expression atlas ATOH1 expression
ReMap ChIP-seq dataset list ATOH1 datasets
Motifs in JASPAR
MA0461.1 (Atoh1; Mus musculus)
MA0461.2 (Atoh1; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0146.010.062.012.052.014.019.024.080.08.084.014.017.08.040.010.0
0243.031.088.033.06.014.02.018.038.052.065.050.03.016.029.012.0
0332.06.049.03.088.07.016.02.0104.011.061.08.026.05.082.00.0
0479.041.0130.00.024.02.03.00.0105.038.065.00.04.07.02.00.0
050.0211.01.00.00.088.00.00.01.0198.01.00.00.00.00.00.0
061.00.00.00.0497.00.00.00.02.00.00.00.00.00.00.00.0
070.04.0480.016.00.00.00.00.00.00.00.00.00.00.00.00.0
080.00.00.00.03.01.00.00.0292.0172.015.01.016.00.00.00.0
095.04.00.0302.09.00.00.0164.00.00.00.015.00.00.00.01.0
100.00.014.00.00.00.04.00.00.00.00.00.00.00.0478.04.0
110.00.00.00.00.00.00.00.011.070.0376.039.00.00.04.00.0
121.06.03.01.012.014.00.044.056.0136.092.096.03.022.010.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.383-1.1140.679-0.9380.504-0.788-0.49-0.260.932-1.3280.981-0.788-0.599-1.3280.244-1.114
020.316-0.0081.0270.054-1.6-0.788-2.584-0.5430.1930.5040.7260.465-2.234-0.658-0.074-0.938
030.023-1.60.445-2.2341.027-1.454-0.658-2.5841.194-1.0220.663-1.328-0.181-1.770.957-4.4
040.920.2691.416-4.4-0.26-2.584-2.234-4.41.2030.1930.726-4.4-1.975-1.454-2.584-4.4
05-4.41.899-3.126-4.4-4.41.027-4.4-4.4-3.1261.836-3.126-4.4-4.4-4.4-4.4-4.4
06-3.126-4.4-4.4-4.42.755-4.4-4.4-4.4-2.584-4.4-4.4-4.4-4.4-4.4-4.4-4.4
07-4.4-1.9752.72-0.658-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
08-4.4-4.4-4.4-4.4-2.234-3.126-4.4-4.42.2241.695-0.721-3.126-0.658-4.4-4.4-4.4
09-1.77-1.975-4.42.257-1.215-4.4-4.41.648-4.4-4.4-4.4-0.721-4.4-4.4-4.4-3.126
10-4.4-4.4-0.788-4.4-4.4-4.4-1.975-4.4-4.4-4.4-4.4-4.4-4.4-4.42.716-1.975
11-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-1.0220.82.4760.219-4.4-4.4-1.975-4.4
12-3.126-1.6-2.234-3.126-0.938-0.788-4.40.3390.5781.4611.0721.114-2.234-0.346-1.114-1.975