Transcription factor | CREB3L2 (GeneCards) | ||||||||
Model | CR3L2_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | HT-SELEX | ||||||||
Model release | HOCOMOCOv10 | ||||||||
Model length | 13 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | YKvWSACGTGdnv | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 1223 | ||||||||
TF family | CREB-related factors {1.1.7} | ||||||||
TF subfamily | CREB-3-like factors {1.1.7.2} | ||||||||
HGNC | HGNC:23720 | ||||||||
EntrezGene | GeneID:64764 (SSTAR profile) | ||||||||
UniProt ID | CR3L2_HUMAN | ||||||||
UniProt AC | Q70SY1 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | CREB3L2 expression | ||||||||
ReMap ChIP-seq dataset list | CREB3L2 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 133.0 | 183.0 | 124.0 | 779.0 |
02 | 106.25 | 101.25 | 882.25 | 129.25 |
03 | 525.0 | 226.0 | 257.0 | 211.0 |
04 | 160.0 | 99.0 | 30.0 | 930.0 |
05 | 4.25 | 265.25 | 884.25 | 65.25 |
06 | 1210.25 | 1.25 | 3.25 | 4.25 |
07 | 3.0 | 1206.0 | 6.0 | 4.0 |
08 | 0.0 | 2.0 | 1215.0 | 2.0 |
09 | 2.5 | 4.5 | 4.5 | 1207.5 |
10 | 5.5 | 10.5 | 1198.5 | 4.5 |
11 | 164.0 | 154.0 | 717.0 | 184.0 |
12 | 165.0 | 729.0 | 160.0 | 165.0 |
13 | 660.75 | 174.75 | 215.75 | 167.75 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.822 | -0.506 | -0.891 | 0.935 |
02 | -1.043 | -1.09 | 1.059 | -0.85 |
03 | 0.541 | -0.297 | -0.169 | -0.365 |
04 | -0.639 | -1.112 | -2.267 | 1.112 |
05 | -3.929 | -0.138 | 1.061 | -1.52 |
06 | 1.375 | -4.618 | -4.111 | -3.929 |
07 | -4.162 | 1.371 | -3.674 | -3.972 |
08 | -5.151 | -4.397 | 1.379 | -4.397 |
09 | -4.272 | -3.889 | -3.889 | 1.372 |
10 | -3.741 | -3.218 | 1.365 | -3.889 |
11 | -0.615 | -0.677 | 0.852 | -0.501 |
12 | -0.609 | 0.869 | -0.639 | -0.609 |
13 | 0.771 | -0.552 | -0.343 | -0.592 |