Model info
| Transcription factor | Creb1 | ||||||||
| Model | CREB1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ndRTGACGYhW | ||||||||
| Best auROC (human) | 0.927 | ||||||||
| Best auROC (mouse) | 0.888 | ||||||||
| Peak sets in benchmark (human) | 63 | ||||||||
| Peak sets in benchmark (mouse) | 8 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | CREB-related factors {1.1.7} | ||||||||
| TF subfamily | CREB-like factors {1.1.7.1} | ||||||||
| MGI | MGI:88494 | ||||||||
| EntrezGene | GeneID:12912 (SSTAR profile) | ||||||||
| UniProt ID | CREB1_MOUSE | ||||||||
| UniProt AC | Q01147 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Creb1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 141.0 | 143.0 | 76.0 | 140.0 |
| 02 | 173.0 | 48.0 | 213.0 | 66.0 |
| 03 | 255.0 | 21.0 | 218.0 | 6.0 |
| 04 | 2.0 | 12.0 | 5.0 | 481.0 |
| 05 | 4.0 | 3.0 | 489.0 | 4.0 |
| 06 | 485.0 | 0.0 | 11.0 | 4.0 |
| 07 | 5.0 | 433.0 | 14.0 | 48.0 |
| 08 | 9.0 | 6.0 | 448.0 | 37.0 |
| 09 | 40.0 | 134.0 | 6.0 | 320.0 |
| 10 | 157.0 | 252.0 | 41.0 | 50.0 |
| 11 | 311.0 | 61.0 | 58.0 | 70.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.119 | 0.133 | -0.49 | 0.112 |
| 02 | 0.322 | -0.938 | 0.528 | -0.628 |
| 03 | 0.707 | -1.725 | 0.551 | -2.819 |
| 04 | -3.573 | -2.234 | -2.961 | 1.338 |
| 05 | -3.126 | -3.325 | 1.355 | -3.126 |
| 06 | 1.347 | -4.4 | -2.311 | -3.126 |
| 07 | -2.961 | 1.234 | -2.096 | -0.938 |
| 08 | -2.484 | -2.819 | 1.268 | -1.189 |
| 09 | -1.114 | 0.069 | -2.819 | 0.932 |
| 10 | 0.225 | 0.695 | -1.09 | -0.898 |
| 11 | 0.904 | -0.705 | -0.754 | -0.57 |