Model info
| Transcription factor | CREB5 (GeneCards) | ||||||||
| Model | CREB5_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRTGACGTCAT | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 1784 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | ATF-2-like factors {1.1.1.3} | ||||||||
| HGNC | HGNC:16844 | ||||||||
| EntrezGene | GeneID:9586 (SSTAR profile) | ||||||||
| UniProt ID | CREB5_HUMAN | ||||||||
| UniProt AC | Q02930 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | CREB5 expression | ||||||||
| ReMap ChIP-seq dataset list | CREB5 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 455.0 | 190.0 | 747.0 | 310.0 |
| 02 | 959.75 | 28.75 | 690.75 | 22.75 |
| 03 | 0.5 | 1.5 | 0.5 | 1699.5 |
| 04 | 0.0 | 0.0 | 1646.0 | 56.0 |
| 05 | 1701.0 | 0.0 | 0.0 | 1.0 |
| 06 | 1.0 | 1649.0 | 1.0 | 51.0 |
| 07 | 1.0 | 0.0 | 1701.0 | 0.0 |
| 08 | 0.5 | 10.5 | 0.5 | 1690.5 |
| 09 | 648.5 | 1047.5 | 1.5 | 4.5 |
| 10 | 1682.0 | 1.0 | 12.0 | 7.0 |
| 11 | 41.75 | 154.75 | 125.75 | 1379.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.067 | -0.801 | 0.561 | -0.315 |
| 02 | 0.811 | -2.636 | 0.483 | -2.854 |
| 03 | -5.199 | -4.846 | -5.199 | 1.382 |
| 04 | -5.437 | -5.437 | 1.35 | -2.0 |
| 05 | 1.382 | -5.437 | -5.437 | -5.007 |
| 06 | -5.007 | 1.351 | -5.007 | -2.09 |
| 07 | -5.007 | -5.437 | 1.382 | -5.437 |
| 08 | -5.199 | -3.543 | -5.199 | 1.376 |
| 09 | 0.42 | 0.898 | -4.846 | -4.208 |
| 10 | 1.371 | -5.007 | -3.429 | -3.876 |
| 11 | -2.282 | -1.004 | -1.209 | 1.173 |