Model info
| Transcription factor | E2F4 (GeneCards) | ||||||||
| Model | E2F4_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | SGCGGGRRddbbnd | ||||||||
| Best auROC (human) | 0.924 | ||||||||
| Best auROC (mouse) | 0.97 | ||||||||
| Peak sets in benchmark (human) | 15 | ||||||||
| Peak sets in benchmark (mouse) | 37 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| HGNC | HGNC:3118 | ||||||||
| EntrezGene | GeneID:1874 (SSTAR profile) | ||||||||
| UniProt ID | E2F4_HUMAN | ||||||||
| UniProt AC | Q16254 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2F4 expression | ||||||||
| ReMap ChIP-seq dataset list | E2F4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 53.0 | 112.0 | 324.0 | 11.0 |
| 02 | 6.0 | 43.0 | 451.0 | 0.0 |
| 03 | 21.0 | 466.0 | 4.0 | 9.0 |
| 04 | 10.0 | 1.0 | 482.0 | 7.0 |
| 05 | 9.0 | 123.0 | 366.0 | 2.0 |
| 06 | 16.0 | 37.0 | 436.0 | 11.0 |
| 07 | 375.0 | 49.0 | 68.0 | 8.0 |
| 08 | 359.0 | 31.0 | 86.0 | 24.0 |
| 09 | 197.0 | 66.0 | 128.0 | 109.0 |
| 10 | 112.0 | 61.0 | 100.0 | 227.0 |
| 11 | 73.0 | 102.0 | 92.0 | 233.0 |
| 12 | 65.0 | 161.0 | 101.0 | 173.0 |
| 13 | 157.0 | 88.0 | 166.0 | 89.0 |
| 14 | 236.0 | 50.0 | 158.0 | 56.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.841 | -0.108 | 0.945 | -2.311 |
| 02 | -2.819 | -1.044 | 1.274 | -4.4 |
| 03 | -1.725 | 1.307 | -3.126 | -2.484 |
| 04 | -2.394 | -3.903 | 1.34 | -2.694 |
| 05 | -2.484 | -0.016 | 1.066 | -3.573 |
| 06 | -1.975 | -1.189 | 1.241 | -2.311 |
| 07 | 1.09 | -0.918 | -0.599 | -2.584 |
| 08 | 1.047 | -1.358 | -0.368 | -1.6 |
| 09 | 0.45 | -0.628 | 0.023 | -0.135 |
| 10 | -0.108 | -0.705 | -0.22 | 0.591 |
| 11 | -0.529 | -0.201 | -0.302 | 0.617 |
| 12 | -0.643 | 0.25 | -0.21 | 0.322 |
| 13 | 0.225 | -0.346 | 0.281 | -0.335 |
| 14 | 0.63 | -0.898 | 0.232 | -0.788 |