Model info
| Transcription factor | E2f6 | ||||||||
| Model | E2F6_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ndRGCGGGARvv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 2029 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| MGI | MGI:1354159 | ||||||||
| EntrezGene | GeneID:50496 (SSTAR profile) | ||||||||
| UniProt ID | E2F6_MOUSE | ||||||||
| UniProt AC | O54917 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2f6 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 412.421 | 313.573 | 552.528 | 585.453 |
| 02 | 376.132 | 119.758 | 858.477 | 509.608 |
| 03 | 275.349 | 219.981 | 1341.107 | 27.538 |
| 04 | 47.372 | 52.644 | 1752.341 | 11.618 |
| 05 | 215.981 | 1598.662 | 4.162 | 45.17 |
| 06 | 107.882 | 53.936 | 1657.432 | 44.724 |
| 07 | 15.996 | 120.926 | 1712.03 | 15.023 |
| 08 | 19.166 | 18.049 | 1807.474 | 19.287 |
| 09 | 1506.37 | 5.874 | 348.004 | 3.726 |
| 10 | 1086.347 | 97.175 | 669.144 | 11.309 |
| 11 | 484.187 | 318.387 | 967.686 | 93.716 |
| 12 | 347.277 | 415.135 | 900.846 | 200.717 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.122 | -0.394 | 0.17 | 0.227 |
| 02 | -0.213 | -1.347 | 0.609 | 0.089 |
| 03 | -0.523 | -0.746 | 1.054 | -2.767 |
| 04 | -2.251 | -2.15 | 1.322 | -3.545 |
| 05 | -0.764 | 1.23 | -4.349 | -2.297 |
| 06 | -1.45 | -2.126 | 1.266 | -2.306 |
| 07 | -3.265 | -1.338 | 1.298 | -3.321 |
| 08 | -3.101 | -3.156 | 1.353 | -3.096 |
| 09 | 1.171 | -4.1 | -0.291 | -4.424 |
| 10 | 0.844 | -1.553 | 0.361 | -3.569 |
| 11 | 0.038 | -0.379 | 0.729 | -1.588 |
| 12 | -0.293 | -0.115 | 0.657 | -0.837 |