Model info
| Transcription factor | E2f7 | ||||||||
| Model | E2F7_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdRGCGGGARvdv | ||||||||
| Best auROC (human) | 0.846 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 16 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| MGI | MGI:1289147 | ||||||||
| EntrezGene | GeneID:52679 (SSTAR profile) | ||||||||
| UniProt ID | E2F7_MOUSE | ||||||||
| UniProt AC | Q6S7F2 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2f7 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 98.0 | 74.0 | 265.0 | 63.0 |
| 02 | 169.0 | 16.0 | 208.0 | 107.0 |
| 03 | 71.0 | 41.0 | 386.0 | 2.0 |
| 04 | 22.0 | 2.0 | 471.0 | 5.0 |
| 05 | 42.0 | 427.0 | 2.0 | 29.0 |
| 06 | 70.0 | 8.0 | 407.0 | 15.0 |
| 07 | 11.0 | 6.0 | 479.0 | 4.0 |
| 08 | 102.0 | 3.0 | 388.0 | 7.0 |
| 09 | 357.0 | 2.0 | 138.0 | 3.0 |
| 10 | 302.0 | 69.0 | 120.0 | 9.0 |
| 11 | 214.0 | 96.0 | 112.0 | 78.0 |
| 12 | 172.0 | 43.0 | 178.0 | 107.0 |
| 13 | 130.0 | 76.0 | 243.0 | 51.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.24 | -0.516 | 0.745 | -0.673 |
| 02 | 0.298 | -1.975 | 0.504 | -0.153 |
| 03 | -0.556 | -1.09 | 1.119 | -3.573 |
| 04 | -1.681 | -3.573 | 1.317 | -2.961 |
| 05 | -1.067 | 1.22 | -3.573 | -1.421 |
| 06 | -0.57 | -2.584 | 1.172 | -2.034 |
| 07 | -2.311 | -2.819 | 1.334 | -3.126 |
| 08 | -0.201 | -3.325 | 1.124 | -2.694 |
| 09 | 1.041 | -3.573 | 0.098 | -3.325 |
| 10 | 0.875 | -0.584 | -0.04 | -2.484 |
| 11 | 0.533 | -0.26 | -0.108 | -0.464 |
| 12 | 0.316 | -1.044 | 0.35 | -0.153 |
| 13 | 0.039 | -0.49 | 0.659 | -0.879 |