Model info
| Transcription factor | ELK3 (GeneCards) | ||||||||
| Model | ELK3_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vnCMGGAWGTGC | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 7 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| HGNC | HGNC:3325 | ||||||||
| EntrezGene | GeneID:2004 (SSTAR profile) | ||||||||
| UniProt ID | ELK3_HUMAN | ||||||||
| UniProt AC | P41970 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELK3 expression | ||||||||
| ReMap ChIP-seq dataset list | ELK3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.245 | 2.774 | 1.585 | 0.396 |
| 02 | 2.509 | 3.17 | 0.66 | 0.66 |
| 03 | 0.66 | 6.34 | 0.0 | 0.0 |
| 04 | 2.906 | 2.377 | 0.0 | 1.717 |
| 05 | 0.0 | 0.0 | 7.0 | 0.0 |
| 06 | 0.0 | 0.0 | 7.0 | 0.0 |
| 07 | 7.0 | 0.0 | 0.0 | 0.0 |
| 08 | 5.019 | 0.66 | 0.0 | 1.321 |
| 09 | 2.774 | 0.0 | 4.226 | 0.0 |
| 10 | 0.0 | 1.189 | 0.0 | 5.811 |
| 11 | 0.0 | 3.17 | 3.83 | 0.0 |
| 12 | 0.165 | 5.448 | 1.222 | 0.165 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.2 | 0.377 | -0.077 | -0.93 |
| 02 | 0.292 | 0.492 | -0.668 | -0.668 |
| 03 | -0.668 | 1.116 | -1.525 | -1.525 |
| 04 | 0.417 | 0.247 | -1.525 | -0.015 |
| 05 | -1.525 | -1.525 | 1.208 | -1.525 |
| 06 | -1.525 | -1.525 | 1.208 | -1.525 |
| 07 | 1.208 | -1.525 | -1.525 | -1.525 |
| 08 | 0.901 | -0.668 | -1.525 | -0.213 |
| 09 | 0.377 | -1.525 | 0.745 | -1.525 |
| 10 | -1.525 | -0.289 | -1.525 | 1.035 |
| 11 | -1.525 | 0.492 | 0.658 | -1.525 |
| 12 | -1.233 | 0.976 | -0.269 | -1.233 |