FOSL1_HUMAN.H11MO.0.A motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v12

Model info

Transcription factor

FOSL1
(GeneCards)

Model

FOSL1_HUMAN.H11MO.0.A

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

12

Quality

A

Motif rank

0

Consensus

ddvTGAGTCAbh

Best auROC (human)

0.988

Best auROC (mouse)

0.952

Peak sets in benchmark (human)

21

Peak sets in benchmark (mouse)

2

Aligned words

500

TF family

Fos-related factors {1.1.2}

TF subfamily

Fos factors {1.1.2.1}

HGNC

EntrezGene

GeneID:8061
(SSTAR profile)

UniProt ID

UniProt AC

P15407
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	3.3954649999999997
0.0005	4.617165
0.0001	7.2456

GTEx tissue expression atlas

FOSL1 expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0477.1 (FOSL1; Homo sapiens)

MA1128.1 (FOSL1::JUN; Homo sapiens)

MA1129.1 (FOSL1::JUN(var.2); Homo sapiens)

MA1137.1 (FOSL1::JUNB; Homo sapiens)

MA1142.1 (FOSL1::JUND; Homo sapiens)

MA1143.1 (FOSL1::JUND(var.2); Homo sapiens)

PCM

	A	C	G	T
01	99.0	93.0	203.0	105.0
02	159.0	82.0	174.0	85.0
03	215.0	135.0	141.0	9.0
04	0.0	0.0	3.0	497.0
05	0.0	2.0	471.0	27.0
06	494.0	1.0	1.0	4.0
07	39.0	0.0	461.0	0.0
08	0.0	0.0	0.0	500.0
09	9.0	490.0	1.0	0.0
10	498.0	2.0	0.0	0.0
11	11.0	206.0	81.0	202.0
12	105.0	201.0	77.0	117.0

PWM

	A	C	G	T
01	-0.23	-0.291	0.48	-0.172
02	0.238	-0.415	0.327	-0.38
03	0.537	0.076	0.119	-2.484
04	-4.4	-4.4	-3.325	1.371
05	-4.4	-3.573	1.317	-1.489
06	1.365	-3.903	-3.903	-3.126
07	-1.138	-4.4	1.296	-4.4
08	-4.4	-4.4	-4.4	1.377
09	-2.484	1.357	-3.903	-4.4
10	1.373	-3.573	-4.4	-4.4
11	-2.311	0.495	-0.427	0.475
12	-0.172	0.47	-0.477	-0.065