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Model info
Transcription factorFoxd3
ModelFOXD3_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
B
Motif rank
0
ConsensusnbnWGTTThYhYdvbn
Best auROC (human)
Best auROC (mouse)0.814
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)11
Aligned words415
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXD {3.3.1.4}
MGIMGI:1347473
EntrezGeneGeneID:15221
(SSTAR profile)
UniProt IDFOXD3_MOUSE
UniProt ACQ61060
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.487210000000001
0.0005 12.90271
0.0001 15.734860000000001
GTEx tissue expression atlas Foxd3 expression
Motifs in JASPAR
MA0041.1 (Foxd3; Rattus norvegicus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
019.014.040.020.029.033.03.063.017.024.033.029.01.018.040.042.0
0214.09.017.016.017.020.04.048.025.032.020.039.08.024.044.078.0
0314.08.09.033.08.05.02.070.014.07.02.062.08.09.015.0149.0
043.03.038.00.021.04.04.00.03.00.025.00.029.015.0269.01.0
050.00.00.056.00.00.00.022.05.01.08.0322.00.00.00.01.0
061.01.00.03.00.00.00.01.00.01.01.06.05.016.020.0360.0
071.00.00.05.02.01.00.015.03.00.03.015.011.01.048.0310.0
084.06.02.05.01.00.01.00.024.04.04.019.0156.064.062.063.0
096.0112.013.054.08.051.00.015.011.025.08.025.06.054.015.012.0
1022.04.05.00.097.032.01.0112.09.09.04.014.026.019.014.047.0
1130.030.017.077.07.020.00.037.01.010.01.012.010.040.06.0117.0
1220.04.012.012.061.04.02.033.014.00.06.04.089.08.030.0116.0
1366.013.093.012.05.06.00.05.015.015.014.06.027.036.063.039.0
1414.034.045.020.016.032.05.017.019.066.058.027.07.019.030.06.0
1515.011.014.016.057.038.08.048.048.044.023.023.018.027.09.016.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.032-0.6040.428-0.2560.110.238-2.0530.879-0.415-0.0760.2380.11-2.95-0.3590.4280.476
02-0.604-1.032-0.415-0.474-0.415-0.256-1.7940.609-0.0360.207-0.2560.403-1.145-0.0760.5231.091
03-0.604-1.145-1.0320.238-1.145-1.588-2.4040.984-0.604-1.272-2.4040.863-1.145-1.032-0.5371.736
04-2.053-2.0530.377-4.246-0.208-1.794-1.794-4.246-2.053-4.246-0.036-4.2460.11-0.5372.326-2.95
05-4.246-4.246-4.2460.762-4.246-4.246-4.246-0.162-1.588-2.95-1.1452.506-4.246-4.246-4.246-2.95
06-2.95-2.95-4.246-2.053-4.246-4.246-4.246-2.95-4.246-2.95-2.95-1.417-1.588-0.474-0.2562.617
07-2.95-4.246-4.246-1.588-2.404-2.95-4.246-0.537-2.053-4.246-2.053-0.537-0.839-2.950.6092.468
08-1.794-1.417-2.404-1.588-2.95-4.246-2.95-4.246-0.076-1.794-1.794-0.3061.7820.8950.8630.879
09-1.4171.452-0.6770.726-1.1450.669-4.246-0.537-0.839-0.036-1.145-0.036-1.4170.726-0.537-0.754
10-0.162-1.794-1.588-4.2461.3080.207-2.951.452-1.032-1.032-1.794-0.6040.002-0.306-0.6040.588
110.1440.144-0.4151.079-1.272-0.256-4.2460.351-2.95-0.931-2.95-0.754-0.9310.428-1.4171.495
12-0.256-1.794-0.754-0.7540.847-1.794-2.4040.238-0.604-4.246-1.417-1.7941.223-1.1450.1441.487
130.925-0.6771.267-0.754-1.588-1.417-4.246-1.588-0.537-0.537-0.604-1.4170.040.3240.8790.403
14-0.6040.2670.545-0.256-0.4740.207-1.588-0.415-0.3060.9250.7970.04-1.272-0.3060.144-1.417
15-0.537-0.839-0.604-0.4740.780.377-1.1450.6090.6090.523-0.118-0.118-0.3590.04-1.032-0.474