Model info
| Transcription factor | Hsf1 | ||||||||
| Model | HSF1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bRGAAnnTTCYRGAA | ||||||||
| Best auROC (human) | 0.996 | ||||||||
| Best auROC (mouse) | 0.989 | ||||||||
| Peak sets in benchmark (human) | 56 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | HSF factors {3.4.1} | ||||||||
| TF subfamily | HSF1 (HSTF1) {3.4.1.0.1} | ||||||||
| MGI | MGI:96238 | ||||||||
| EntrezGene | GeneID:15499 (SSTAR profile) | ||||||||
| UniProt ID | HSF1_MOUSE | ||||||||
| UniProt AC | P38532 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Hsf1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 82.0 | 133.0 | 83.0 | 202.0 |
| 02 | 301.0 | 12.0 | 171.0 | 16.0 |
| 03 | 4.0 | 0.0 | 495.0 | 1.0 |
| 04 | 470.0 | 16.0 | 8.0 | 6.0 |
| 05 | 456.0 | 9.0 | 20.0 | 15.0 |
| 06 | 144.0 | 129.0 | 125.0 | 102.0 |
| 07 | 106.0 | 116.0 | 181.0 | 97.0 |
| 08 | 43.0 | 36.0 | 18.0 | 403.0 |
| 09 | 28.0 | 8.0 | 36.0 | 428.0 |
| 10 | 2.0 | 495.0 | 3.0 | 0.0 |
| 11 | 5.0 | 159.0 | 21.0 | 315.0 |
| 12 | 331.0 | 4.0 | 161.0 | 4.0 |
| 13 | 0.0 | 0.0 | 497.0 | 3.0 |
| 14 | 459.0 | 9.0 | 18.0 | 14.0 |
| 15 | 407.0 | 23.0 | 51.0 | 19.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.415 | 0.061 | -0.403 | 0.475 |
| 02 | 0.872 | -2.234 | 0.31 | -1.975 |
| 03 | -3.126 | -4.4 | 1.367 | -3.903 |
| 04 | 1.315 | -1.975 | -2.584 | -2.819 |
| 05 | 1.285 | -2.484 | -1.77 | -2.034 |
| 06 | 0.14 | 0.031 | 0.0 | -0.201 |
| 07 | -0.163 | -0.074 | 0.366 | -0.25 |
| 08 | -1.044 | -1.215 | -1.868 | 1.162 |
| 09 | -1.454 | -2.584 | -1.215 | 1.222 |
| 10 | -3.573 | 1.367 | -3.325 | -4.4 |
| 11 | -2.961 | 0.238 | -1.725 | 0.917 |
| 12 | 0.966 | -3.126 | 0.25 | -3.126 |
| 13 | -4.4 | -4.4 | 1.371 | -3.325 |
| 14 | 1.292 | -2.484 | -1.868 | -2.096 |
| 15 | 1.172 | -1.64 | -0.879 | -1.818 |