Check the newest release v12
Model info
Transcription factorTCF12
(GeneCards)
ModelHTF4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnvnnvCAGSTGYn
Best auROC (human)0.936
Best auROC (mouse)0.98
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)10
Aligned words508
TF familyE2A-related factors {1.2.1}
TF subfamilyHTF-4 (TCF-12, HEB) {1.2.1.0.3}
HGNCHGNC:11623
EntrezGeneGeneID:6938
(SSTAR profile)
UniProt IDHTF4_HUMAN
UniProt ACQ99081
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.596565
0.0005 11.012910000000002
0.0001 15.851825
GTEx tissue expression atlas TCF12 expression
ReMap ChIP-seq dataset list TCF12 datasets
Motifs in JASPAR
MA0521.1 (Tcf12; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0173.014.076.07.040.010.010.019.037.014.066.07.022.014.077.014.0
0266.027.057.022.025.013.01.013.087.057.037.048.014.09.013.011.0
0382.032.046.032.039.027.011.029.053.024.017.014.023.020.032.019.0
0494.022.080.01.061.031.09.02.019.042.041.04.018.019.055.02.0
053.0188.01.00.03.0110.00.01.05.0180.00.00.00.09.00.00.0
0611.00.00.00.0485.00.02.00.01.00.00.00.01.00.00.00.0
071.00.0496.01.00.00.00.00.00.00.02.00.00.00.00.00.0
081.00.00.00.00.00.00.00.089.0140.0265.04.01.00.00.00.0
092.00.00.089.04.02.00.0134.01.03.01.0260.00.00.00.04.0
100.00.07.00.01.00.04.00.01.00.00.00.08.03.0472.04.0
114.05.00.01.01.01.00.01.015.0198.052.0218.01.01.01.01.0
127.03.05.06.0113.024.09.059.04.027.04.018.014.042.075.090.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.841-0.7880.881-1.4540.244-1.114-1.114-0.490.167-0.7880.741-1.454-0.346-0.7880.894-0.788
020.741-0.1440.595-0.346-0.22-0.86-3.126-0.861.0160.5950.1670.425-0.788-1.215-0.86-1.022
030.9570.0230.3830.0230.219-0.144-1.022-0.0740.523-0.26-0.599-0.788-0.302-0.4390.023-0.49
041.093-0.3460.932-3.1260.663-0.008-1.215-2.584-0.490.2930.269-1.975-0.543-0.490.56-2.584
05-2.2341.784-3.126-4.4-2.2341.25-4.4-3.126-1.771.741-4.4-4.4-4.4-1.215-4.4-4.4
06-1.022-4.4-4.4-4.42.731-4.4-2.584-4.4-3.126-4.4-4.4-4.4-3.126-4.4-4.4-4.4
07-3.126-4.42.753-3.126-4.4-4.4-4.4-4.4-4.4-4.4-2.584-4.4-4.4-4.4-4.4-4.4
08-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.41.0391.492.127-1.975-3.126-4.4-4.4-4.4
09-2.584-4.4-4.41.039-1.975-2.584-4.41.446-3.126-2.234-3.1262.108-4.4-4.4-4.4-1.975
10-4.4-4.4-1.454-4.4-3.126-4.4-1.975-4.4-3.126-4.4-4.4-4.4-1.328-2.2342.703-1.975
11-1.975-1.77-4.4-3.126-3.126-3.126-4.4-3.126-0.7211.8360.5041.932-3.126-3.126-3.126-3.126
12-1.454-2.234-1.77-1.61.276-0.26-1.2150.63-1.975-0.144-1.975-0.543-0.7880.2930.8681.05