Check the newest release v12
Model info
Transcription factorTcf12
ModelHTF4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnvCAGSTGKKnnndn
Best auROC (human)0.918
Best auROC (mouse)0.988
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)10
Aligned words529
TF familyE2A-related factors {1.2.1}
TF subfamilyHTF-4 (TCF-12, HEB) {1.2.1.0.3}
MGIMGI:101877
EntrezGeneGeneID:21406
(SSTAR profile)
UniProt IDHTF4_MOUSE
UniProt ACQ61286
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.89061
0.0005 11.664560000000002
0.0001 15.38671
GTEx tissue expression atlas Tcf12 expression
Motifs in JASPAR
MA0521.1 (Tcf12; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0142.026.091.09.023.030.018.04.013.041.068.02.012.034.082.05.0
021.081.03.05.05.0125.00.01.010.0240.08.01.01.013.02.04.0
0310.03.00.04.0398.02.06.053.010.01.01.01.07.00.00.04.0
041.074.0342.08.00.00.06.00.01.01.04.01.01.013.043.05.0
051.02.00.00.04.080.01.03.024.0220.0146.05.00.07.07.00.0
060.01.00.028.06.00.02.0301.00.01.03.0150.00.00.00.08.0
070.00.05.01.00.00.02.00.00.00.05.00.03.05.0467.012.0
080.01.01.01.01.01.01.02.041.09.0147.0282.02.01.02.08.0
093.04.034.03.01.02.05.04.01.029.097.024.07.034.0206.046.0
102.03.01.06.012.018.02.037.057.0105.075.0105.09.010.030.028.0
1117.08.035.020.053.022.05.056.046.019.014.029.050.027.048.051.0
1279.028.028.031.017.015.06.038.014.017.041.030.017.022.052.065.0
1372.06.032.017.048.015.04.015.046.019.045.017.031.029.059.045.0
1421.091.052.033.020.026.07.016.031.048.040.021.019.026.018.031.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.293-0.1811.061-1.215-0.302-0.04-0.543-1.975-0.860.2690.771-2.584-0.9380.0830.957-1.77
02-3.1260.945-2.234-1.77-1.771.377-4.4-3.126-1.1142.028-1.328-3.126-3.126-0.86-2.584-1.975
03-1.114-2.234-4.4-1.9752.533-2.584-1.60.523-1.114-3.126-3.126-3.126-1.454-4.4-4.4-1.975
04-3.1260.8552.382-1.328-4.4-4.4-1.6-4.4-3.126-3.126-1.975-3.126-3.126-0.860.316-1.77
05-3.126-2.584-4.4-4.4-1.9750.932-3.126-2.234-0.261.9411.532-1.77-4.4-1.454-1.454-4.4
06-4.4-3.126-4.4-0.108-1.6-4.4-2.5842.254-4.4-3.126-2.2341.559-4.4-4.4-4.4-1.328
07-4.4-4.4-1.77-3.126-4.4-4.4-2.584-4.4-4.4-4.4-1.77-4.4-2.234-1.772.693-0.938
08-4.4-3.126-3.126-3.126-3.126-3.126-3.126-2.5840.269-1.2151.5392.189-2.584-3.126-2.584-1.328
09-2.234-1.9750.083-2.234-3.126-2.584-1.77-1.975-3.126-0.0741.124-0.26-1.4540.0831.8750.383
10-2.584-2.234-3.126-1.6-0.938-0.543-2.5840.1670.5951.2030.8681.203-1.215-1.114-0.04-0.108
11-0.599-1.3280.112-0.4390.523-0.346-1.770.5780.383-0.49-0.788-0.0740.465-0.1440.4250.485
120.92-0.108-0.108-0.008-0.599-0.721-1.60.193-0.788-0.5990.269-0.04-0.599-0.3460.5040.726
130.828-1.60.023-0.5990.425-0.721-1.975-0.7210.383-0.490.361-0.599-0.008-0.0740.630.361
14-0.3921.0610.5040.054-0.439-0.181-1.454-0.658-0.0080.4250.244-0.392-0.49-0.181-0.543-0.008