Model info
| Transcription factor | Junb | ||||||||
| Model | JUNB_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nTGAGTCAb | ||||||||
| Best auROC (human) | 0.977 | ||||||||
| Best auROC (mouse) | 0.935 | ||||||||
| Peak sets in benchmark (human) | 8 | ||||||||
| Peak sets in benchmark (mouse) | 25 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | Jun factors {1.1.1.1} | ||||||||
| MGI | MGI:96647 | ||||||||
| EntrezGene | GeneID:16477 (SSTAR profile) | ||||||||
| UniProt ID | JUNB_MOUSE | ||||||||
| UniProt AC | P09450 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Junb expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 200.0 | 127.0 | 127.0 | 46.0 |
| 02 | 6.0 | 3.0 | 9.0 | 482.0 |
| 03 | 14.0 | 4.0 | 428.0 | 54.0 |
| 04 | 484.0 | 3.0 | 2.0 | 11.0 |
| 05 | 102.0 | 0.0 | 398.0 | 0.0 |
| 06 | 7.0 | 18.0 | 10.0 | 465.0 |
| 07 | 24.0 | 463.0 | 9.0 | 4.0 |
| 08 | 489.0 | 8.0 | 1.0 | 2.0 |
| 09 | 17.0 | 203.0 | 94.0 | 186.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.465 | 0.016 | 0.016 | -0.979 |
| 02 | -2.819 | -3.325 | -2.484 | 1.34 |
| 03 | -2.096 | -3.126 | 1.222 | -0.823 |
| 04 | 1.345 | -3.325 | -3.573 | -2.311 |
| 05 | -0.201 | -4.4 | 1.15 | -4.4 |
| 06 | -2.694 | -1.868 | -2.394 | 1.305 |
| 07 | -1.6 | 1.3 | -2.484 | -3.126 |
| 08 | 1.355 | -2.584 | -3.903 | -3.573 |
| 09 | -1.92 | 0.48 | -0.281 | 0.393 |