Model info
| Transcription factor | MAFA (GeneCards) | ||||||||
| Model | MAFA_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 21 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bKGCTGWMShhSYWvYYWYYv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 27 | ||||||||
| TF family | Maf-related factors {1.1.3} | ||||||||
| TF subfamily | Large Maf factors {1.1.3.1} | ||||||||
| HGNC | HGNC:23145 | ||||||||
| EntrezGene | GeneID:389692 (SSTAR profile) | ||||||||
| UniProt ID | MAFA_HUMAN | ||||||||
| UniProt AC | Q8NHW3 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MAFA expression | ||||||||
| ReMap ChIP-seq dataset list | MAFA datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.712 | 9.66 | 9.965 | 4.663 |
| 02 | 2.804 | 0.0 | 7.558 | 16.639 |
| 03 | 0.853 | 0.853 | 20.966 | 4.327 |
| 04 | 0.0 | 26.573 | 0.427 | 0.0 |
| 05 | 2.499 | 0.0 | 0.0 | 24.501 |
| 06 | 0.0 | 2.682 | 24.318 | 0.0 |
| 07 | 19.321 | 2.804 | 0.427 | 4.449 |
| 08 | 4.023 | 16.029 | 3.718 | 3.23 |
| 09 | 0.0 | 10.3 | 9.813 | 6.887 |
| 10 | 8.777 | 12.372 | 0.975 | 4.876 |
| 11 | 4.51 | 10.178 | 3.169 | 9.142 |
| 12 | 0.975 | 4.144 | 18.102 | 3.779 |
| 13 | 2.194 | 16.639 | 1.828 | 6.339 |
| 14 | 17.919 | 2.255 | 2.194 | 4.632 |
| 15 | 6.643 | 3.901 | 13.713 | 2.743 |
| 16 | 2.255 | 14.567 | 1.828 | 8.35 |
| 17 | 6.826 | 10.727 | 0.0 | 9.447 |
| 18 | 4.023 | 3.596 | 2.804 | 16.578 |
| 19 | 2.255 | 9.264 | 2.194 | 13.287 |
| 20 | 3.047 | 17.553 | 2.377 | 4.023 |
| 21 | 6.765 | 8.594 | 8.716 | 2.926 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.762 | 0.325 | 0.354 | -0.322 |
| 02 | -0.736 | -2.218 | 0.101 | 0.835 |
| 03 | -1.508 | -1.508 | 1.057 | -0.385 |
| 04 | -2.218 | 1.286 | -1.801 | -2.218 |
| 05 | -0.824 | -2.218 | -2.218 | 1.207 |
| 06 | -2.218 | -0.77 | 1.2 | -2.218 |
| 07 | 0.978 | -0.736 | -1.801 | -0.362 |
| 08 | -0.446 | 0.8 | -0.511 | -0.625 |
| 09 | -2.218 | 0.384 | 0.34 | 0.018 |
| 10 | 0.237 | 0.555 | -1.437 | -0.284 |
| 11 | -0.351 | 0.373 | -0.64 | 0.274 |
| 12 | -1.437 | -0.422 | 0.916 | -0.498 |
| 13 | -0.92 | 0.835 | -1.049 | -0.056 |
| 14 | 0.906 | -0.9 | -0.92 | -0.328 |
| 15 | -0.014 | -0.472 | 0.652 | -0.753 |
| 16 | -0.9 | 0.709 | -1.049 | 0.192 |
| 17 | 0.01 | 0.422 | -2.218 | 0.305 |
| 18 | -0.446 | -0.539 | -0.736 | 0.832 |
| 19 | -0.9 | 0.287 | -0.92 | 0.622 |
| 20 | -0.671 | 0.886 | -0.861 | -0.446 |
| 21 | 0.002 | 0.218 | 0.231 | -0.703 |