MYCN_MOUSE.H11DI.0.A motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v12

Model info

Transcription factor

Model

MYCN_MOUSE.H11DI.0.A

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

15

Quality

A

Motif rank

0

Consensus

vRvbMACRWGSnvvv

Best auROC (human)

0.921

Best auROC (mouse)

0.961

Peak sets in benchmark (human)

32

Peak sets in benchmark (mouse)

10

Aligned words

493

TF family

bHLH-ZIP factors {1.2.6}

TF subfamily

Myc / Max factors {1.2.6.5}

MGI

EntrezGene

GeneID:18109
(SSTAR profile)

UniProt ID

UniProt AC

P03966
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	8.056560000000001
0.0005	9.46351
0.0001	12.36536

GTEx tissue expression atlas

Mycn expression

Motifs in JASPAR

MA0104.1 (Mycn; Mus musculus)

MA0104.2 (Mycn; Mus musculus)

MA0104.3 (Mycn; Mus musculus)

MA0104.4 (MYCN; Homo sapiens)

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	21.0	3.0	63.0	3.0	47.0	9.0	55.0	10.0	59.0	26.0	109.0	7.0	17.0	5.0	47.0	4.0
02	40.0	30.0	61.0	13.0	26.0	2.0	12.0	3.0	105.0	40.0	103.0	26.0	5.0	7.0	11.0	1.0
03	17.0	43.0	95.0	21.0	6.0	31.0	36.0	6.0	10.0	82.0	72.0	23.0	0.0	5.0	32.0	6.0
04	2.0	25.0	6.0	0.0	30.0	124.0	1.0	6.0	27.0	191.0	11.0	6.0	4.0	44.0	4.0	4.0
05	53.0	0.0	10.0	0.0	312.0	4.0	59.0	9.0	10.0	3.0	8.0	1.0	14.0	0.0	2.0	0.0
06	12.0	326.0	49.0	2.0	2.0	2.0	2.0	1.0	7.0	67.0	5.0	0.0	2.0	6.0	1.0	1.0
07	14.0	1.0	7.0	1.0	86.0	2.0	295.0	18.0	22.0	1.0	30.0	4.0	0.0	1.0	3.0	0.0
08	11.0	2.0	15.0	94.0	1.0	0.0	0.0	4.0	39.0	31.0	10.0	255.0	3.0	3.0	2.0	15.0
09	1.0	0.0	46.0	7.0	0.0	0.0	25.0	11.0	6.0	1.0	18.0	2.0	5.0	6.0	328.0	29.0
10	3.0	2.0	7.0	0.0	2.0	4.0	1.0	0.0	30.0	63.0	283.0	41.0	0.0	3.0	43.0	3.0
11	10.0	11.0	12.0	2.0	19.0	15.0	23.0	15.0	83.0	120.0	77.0	54.0	11.0	8.0	16.0	9.0
12	36.0	17.0	53.0	17.0	36.0	31.0	56.0	31.0	41.0	22.0	58.0	7.0	14.0	8.0	46.0	12.0
13	33.0	17.0	64.0	13.0	37.0	10.0	18.0	13.0	67.0	43.0	79.0	24.0	14.0	6.0	31.0	16.0
14	41.0	21.0	72.0	17.0	9.0	35.0	26.0	6.0	37.0	71.0	66.0	18.0	3.0	22.0	35.0	6.0

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	-0.361	-2.204	0.725	-2.204	0.434	-1.185	0.59	-1.084	0.66	-0.151	1.271	-1.425	-0.569	-1.74	0.434	-1.946
02	0.274	-0.01	0.693	-0.83	-0.151	-2.554	-0.908	-2.204	1.233	0.274	1.214	-0.151	-1.74	-1.425	-0.992	-3.097
03	-0.569	0.346	1.134	-0.361	-1.57	0.022	0.17	-1.57	-1.084	0.987	0.858	-0.272	-4.375	-1.74	0.054	-1.57
04	-2.554	-0.19	-1.57	-4.375	-0.01	1.399	-3.097	-1.57	-0.114	1.83	-0.992	-1.57	-1.946	0.369	-1.946	-1.946
05	0.553	-4.375	-1.084	-4.375	2.32	-1.946	0.66	-1.185	-1.084	-2.204	-1.298	-3.097	-0.758	-4.375	-2.554	-4.375
06	-0.908	2.364	0.475	-2.554	-2.554	-2.554	-2.554	-3.097	-1.425	0.786	-1.74	-4.375	-2.554	-1.57	-3.097	-3.097
07	-0.758	-3.097	-1.425	-3.097	1.035	-2.554	2.264	-0.513	-0.316	-3.097	-0.01	-1.946	-4.375	-3.097	-2.204	-4.375
08	-0.992	-2.554	-0.691	1.123	-3.097	-4.375	-4.375	-1.946	0.249	0.022	-1.084	2.119	-2.204	-2.204	-2.554	-0.691
09	-3.097	-4.375	0.413	-1.425	-4.375	-4.375	-0.19	-0.992	-1.57	-3.097	-0.513	-2.554	-1.74	-1.57	2.37	-0.044
10	-2.204	-2.554	-1.425	-4.375	-2.554	-1.946	-3.097	-4.375	-0.01	0.725	2.223	0.299	-4.375	-2.204	0.346	-2.204
11	-1.084	-0.992	-0.908	-2.554	-0.46	-0.691	-0.272	-0.691	0.999	1.366	0.925	0.572	-0.992	-1.298	-0.628	-1.185
12	0.17	-0.569	0.553	-0.569	0.17	0.022	0.608	0.022	0.299	-0.316	0.643	-1.425	-0.758	-1.298	0.413	-0.908
13	0.084	-0.569	0.741	-0.83	0.197	-1.084	-0.513	-0.83	0.786	0.346	0.95	-0.23	-0.758	-1.57	0.022	-0.628
14	0.299	-0.361	0.858	-0.569	-1.185	0.142	-0.151	-1.57	0.197	0.844	0.771	-0.513	-2.204	-0.316	0.142	-1.57