Check the newest release v12
Model info
Transcription factorMyod1
ModelMYOD1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusnnnvCAGCTGYYbbhbbbnnbbn
Best auROC (human)0.993
Best auROC (mouse)0.998
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)63
Aligned words500
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyMyogenic transcription factors {1.2.2.1}
MGIMGI:97275
EntrezGeneGeneID:17927
(SSTAR profile)
UniProt IDMYOD1_MOUSE
UniProt ACP10085
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.10021
0.0005 6.774660000000001
0.0001 12.82076
GTEx tissue expression atlas Myod1 expression
Motifs in JASPAR
MA0499.1 (Myod1; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.38834.85841.40915.56243.36251.96911.07745.11820.09848.3543.47417.4358.73341.80949.09713.261
0213.52413.10344.08115.87249.74528.03511.39587.81132.86739.35351.04621.7925.95923.43649.09712.884
0313.9120.28664.952.95133.77434.48911.29424.3724.48752.01969.9739.144.83827.172100.8175.531
040.077.0090.00.00.0133.9660.00.00.92245.0111.1020.00.041.9910.00.0
050.920.00.00.0492.9260.9391.0123.0991.1020.00.00.00.00.00.00.0
061.14499.903385.0398.8630.00.9390.00.00.00.01.0120.00.00.03.0990.0
070.01.1440.00.00.91298.9030.01.0270.0388.2460.00.9040.08.8630.00.0
080.00.00.00.9120.00.980.0496.1760.00.00.00.00.00.00.01.932
090.00.00.00.00.00.00.980.00.00.00.00.00.03.704495.3160.0
100.00.00.00.00.03.7040.00.02.049214.63619.313260.2980.00.00.00.0
110.00.9381.1110.02.00467.5843.887144.8650.010.361.167.7930.0149.88325.02285.393
120.02.0040.00.052.125101.2916.61658.7340.93121.0619.1880.011.76584.4120.59421.293
134.8934.99617.8587.0779.83123.60113.03162.29214.11469.39832.51730.372.93946.9759.81220.301
143.13810.82913.014.79556.81776.5721.994139.58711.53228.90719.17113.6088.89548.89337.2624.991
157.23415.82148.5968.73147.20364.36714.03139.6018.65725.52629.3237.9292.78227.535134.2618.404
163.9215.91931.96414.07335.75550.7129.61437.16821.708111.69334.75458.0561.04529.57232.43411.613
172.96520.79730.6747.99217.021121.2627.46762.1457.75462.11326.46512.4362.84181.43628.6278.007
187.1017.88111.7573.84299.77289.8239.19986.8137.64336.05336.43913.0995.24745.1827.74112.411
1917.74343.79248.18210.04560.62855.16411.25851.88614.85533.46221.04615.7748.97429.52263.12314.546
2010.66914.70326.3650.46828.61938.6467.78586.8919.51143.02623.47257.6018.67515.03836.49232.045
218.46620.22928.13810.6426.01637.1135.91842.36711.78929.84228.20824.277.939140.61447.70130.75
226.02715.85923.5338.791102.93149.19512.66163.0117.40236.98441.07414.5048.56841.92939.05918.471
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.7610.1080.278-0.6850.3240.504-1.0150.363-0.4350.4320.327-0.574-1.2440.2880.447-0.841
02-0.822-0.8520.34-0.6660.46-0.107-0.9881.0250.050.2280.486-0.355-1.606-0.2840.447-0.869
03-0.794-0.4250.725-2.2490.0770.097-0.996-0.245-0.240.5050.799-1.2-1.801-0.1381.163-1.676
04-4.40.895-4.4-4.4-4.41.446-4.4-4.4-3.1852.049-3.055-4.4-4.40.292-4.4-4.4
05-3.185-4.4-4.4-4.42.747-3.171-3.118-2.205-3.055-4.4-4.4-4.4-4.4-4.4-4.4-4.4
06-3.0271.1542.5-1.23-4.4-3.171-4.4-4.4-4.4-4.4-3.118-4.4-4.4-4.4-2.205-4.4
07-4.4-3.027-4.4-4.4-3.1921.144-4.4-3.107-4.42.508-4.4-3.198-4.4-1.23-4.4-4.4
08-4.4-4.4-4.4-3.192-4.4-3.141-4.42.753-4.4-4.4-4.4-4.4-4.4-4.4-4.4-2.613
09-4.4-4.4-4.4-4.4-4.4-4.4-3.141-4.4-4.4-4.4-4.4-4.4-4.4-2.0452.752-4.4
10-4.4-4.4-4.4-4.4-4.4-2.045-4.4-4.4-2.5631.916-0.4742.109-4.4-4.4-4.4-4.4
11-4.4-3.172-3.049-4.4-2.5820.765-2.0011.524-4.4-1.08-3.017-1.352-4.41.558-0.2190.997
12-4.4-2.582-4.4-4.40.5071.167-0.6210.625-3.177-0.389-1.195-4.4-0.9570.9861.341-0.378
13-1.7910.112-0.55-1.444-1.131.366-0.8580.684-0.780.7910.039-0.028-2.2520.403-1.132-0.425
14-2.194-1.037-0.859-1.8090.5920.889-2.5861.487-0.976-0.077-0.481-0.816-1.2260.4430.174-0.22
15-1.423-0.6690.437-1.2440.4080.716-0.7860.234-1.252-0.2-0.063-1.336-2.3-0.1251.448-0.521
16-1.994-0.6630.022-0.7830.1330.479-1.1520.171-0.3591.2650.1050.614-3.094-0.0550.037-0.969
17-2.244-0.401-0.018-1.329-0.5971.347-1.3930.681-1.3570.681-0.164-0.903-2.2820.95-0.087-1.327
18-1.441-1.342-0.957-2.0121.1521.048-1.1941.014-1.3710.1410.152-0.853-1.7250.365-0.118-0.905
19-0.5570.3340.429-1.1090.6570.563-0.9990.502-0.730.068-0.389-0.672-1.218-0.0560.697-0.751
20-1.051-0.74-0.1680.475-0.0870.21-1.3541.015-0.4640.316-0.2820.606-1.25-0.7180.1530.025
21-1.273-0.428-0.104-1.054-0.1810.17-1.6130.301-0.955-0.046-0.101-0.249-1.3351.4940.419-0.016
22-1.596-0.666-0.28-1.2371.1830.449-0.8860.695-0.5760.1670.27-0.753-1.2620.2910.221-0.517