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Model info
Transcription factorNfya
ModelNFYA_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnnbRdCCAATvRvMRn
Best auROC (human)0.983
Best auROC (mouse)0.957
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)14
Aligned words507
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B) {4.2.1.0.1}
MGIMGI:97316
EntrezGeneGeneID:18044
(SSTAR profile)
UniProt IDNFYA_MOUSE
UniProt ACP23708
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.502010000000002
0.0005 11.39941
0.0001 15.34171
GTEx tissue expression atlas Nfya expression
Motifs in JASPAR
MA0060.1 (NFYA; Mus musculus/Rattus norvegicus/Xenopus laevis/Xenopus (Silurana) tropicalis/Gallus gallus/Homo sapiens/Bos taurus/Oryctolagus cuniculus)
MA0060.2 (NFYA; Homo sapiens)
MA0060.3 (NFYA; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0123.042.029.046.040.021.021.046.023.034.024.031.017.048.012.043.0
0210.035.019.039.010.046.020.069.04.041.09.032.026.069.018.053.0
0315.07.028.00.0128.022.039.02.046.01.018.01.082.013.095.03.0
0465.09.0169.028.018.02.013.010.062.010.067.041.03.00.03.00.0
0511.0135.02.00.01.017.02.01.027.0223.01.01.05.071.00.03.0
0629.015.00.00.05.0434.01.06.02.03.00.00.03.01.00.01.0
0739.00.00.00.0445.05.01.02.01.00.00.00.07.00.00.00.0
08454.021.014.03.03.02.00.00.01.00.00.00.01.00.00.01.0
0910.09.010.0430.00.01.02.020.02.01.02.09.01.00.01.02.0
103.07.03.00.02.05.04.00.02.03.08.02.097.0223.0124.017.0
1134.03.066.01.0180.010.046.02.094.03.040.02.012.01.06.00.0
1267.057.0170.026.04.01.08.04.053.032.068.05.01.01.03.00.0
1374.022.025.04.050.016.013.012.0160.052.026.011.020.07.04.04.0
14156.014.0109.025.038.03.046.010.032.06.023.07.08.03.017.03.0
1574.047.083.030.010.09.06.01.046.073.044.032.09.011.017.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.3020.293-0.0740.3830.244-0.392-0.3920.383-0.3020.083-0.26-0.008-0.5990.425-0.9380.316
02-1.1140.112-0.490.219-1.1140.383-0.4390.785-1.9750.269-1.2150.023-0.1810.785-0.5430.523
03-0.721-1.454-0.108-4.41.401-0.3460.219-2.5840.383-3.126-0.543-3.1260.957-0.861.104-2.234
040.726-1.2151.678-0.108-0.543-2.584-0.86-1.1140.679-1.1140.7560.269-2.234-4.4-2.234-4.4
05-1.0221.454-2.584-4.4-3.126-0.599-2.584-3.126-0.1441.955-3.126-3.126-1.770.814-4.4-2.234
06-0.074-0.721-4.4-4.4-1.772.62-3.126-1.6-2.584-2.234-4.4-4.4-2.234-3.126-4.4-3.126
070.219-4.4-4.4-4.42.645-1.77-3.126-2.584-3.126-4.4-4.4-4.4-1.454-4.4-4.4-4.4
082.665-0.392-0.788-2.234-2.234-2.584-4.4-4.4-3.126-4.4-4.4-4.4-3.126-4.4-4.4-3.126
09-1.114-1.215-1.1142.61-4.4-3.126-2.584-0.439-2.584-3.126-2.584-1.215-3.126-4.4-3.126-2.584
10-2.234-1.454-2.234-4.4-2.584-1.77-1.975-4.4-2.584-2.234-1.328-2.5841.1241.9551.369-0.599
110.083-2.2340.741-3.1261.741-1.1140.383-2.5841.093-2.2340.244-2.584-0.938-3.126-1.6-4.4
120.7560.5951.684-0.181-1.975-3.126-1.328-1.9750.5230.0230.771-1.77-3.126-3.126-2.234-4.4
130.855-0.346-0.22-1.9750.465-0.658-0.86-0.9381.6230.504-0.181-1.022-0.439-1.454-1.975-1.975
141.598-0.7881.241-0.220.193-2.2340.383-1.1140.023-1.6-0.302-1.454-1.328-2.234-0.599-2.234
150.8550.4040.969-0.04-1.114-1.215-1.6-3.1260.3830.8410.3390.023-1.215-1.022-0.599-1.328