Model info
| Transcription factor | Nfyb | ||||||||
| Model | NFYB_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bRRCCAATSRSvd | ||||||||
| Best auROC (human) | 0.987 | ||||||||
| Best auROC (mouse) | 0.997 | ||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 1163 | ||||||||
| TF family | Heteromeric CCAAT-binding factors {4.2.1} | ||||||||
| TF subfamily | NF-YB (CP1B, CBF-A) {4.2.1.0.2} | ||||||||
| MGI | MGI:97317 | ||||||||
| EntrezGene | GeneID:18045 (SSTAR profile) | ||||||||
| UniProt ID | NFYB_MOUSE | ||||||||
| UniProt AC | P63139 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Nfyb expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 144.512 | 530.746 | 184.341 | 288.24 |
| 02 | 659.785 | 45.592 | 412.035 | 30.426 |
| 03 | 339.792 | 53.682 | 653.627 | 100.737 |
| 04 | 0.799 | 1140.196 | 5.499 | 1.344 |
| 05 | 1.356 | 1138.176 | 6.82 | 1.487 |
| 06 | 1139.921 | 7.32 | 0.0 | 0.598 |
| 07 | 1134.885 | 9.371 | 3.495 | 0.088 |
| 08 | 4.423 | 5.287 | 6.764 | 1131.365 |
| 09 | 59.598 | 656.457 | 384.392 | 47.392 |
| 10 | 741.739 | 52.507 | 340.191 | 13.402 |
| 11 | 139.626 | 194.231 | 755.358 | 58.624 |
| 12 | 513.993 | 338.143 | 232.63 | 63.073 |
| 13 | 358.001 | 122.157 | 509.809 | 157.872 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.68 | 0.612 | -0.439 | 0.004 |
| 02 | 0.829 | -1.808 | 0.36 | -2.194 |
| 03 | 0.168 | -1.65 | 0.82 | -1.036 |
| 04 | -4.725 | 1.375 | -3.683 | -4.532 |
| 05 | -4.529 | 1.373 | -3.516 | -4.487 |
| 06 | 1.375 | -3.459 | -5.099 | -4.807 |
| 07 | 1.37 | -3.256 | -4.006 | -5.051 |
| 08 | -3.843 | -3.713 | -3.522 | 1.367 |
| 09 | -1.549 | 0.824 | 0.291 | -1.771 |
| 10 | 0.946 | -1.672 | 0.169 | -2.947 |
| 11 | -0.714 | -0.387 | 0.964 | -1.565 |
| 12 | 0.58 | 0.163 | -0.208 | -1.494 |
| 13 | 0.22 | -0.846 | 0.572 | -0.593 |