Transcription factor | NOBOX (GeneCards) | ||||||||
Model | NOBOX_HUMAN.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 9 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | hTAATTGvb | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 66 | ||||||||
TF family | Paired-related HD factors {3.1.3} | ||||||||
TF subfamily | NOBOX {3.1.3.15} | ||||||||
HGNC | HGNC:22448 | ||||||||
EntrezGene | GeneID:135935 (SSTAR profile) | ||||||||
UniProt ID | NOBOX_HUMAN | ||||||||
UniProt AC | O60393 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | NOBOX expression | ||||||||
ReMap ChIP-seq dataset list | NOBOX datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 19.332 | 21.853 | 3.362 | 21.772 |
02 | 0.0 | 0.0 | 0.0 | 66.319 |
03 | 64.638 | 0.0 | 0.0 | 1.681 |
04 | 64.638 | 1.681 | 0.0 | 0.0 |
05 | 1.681 | 1.681 | 1.681 | 61.276 |
06 | 1.681 | 0.0 | 6.724 | 57.914 |
07 | 24.291 | 0.0 | 42.028 | 0.0 |
08 | 12.524 | 20.174 | 29.418 | 4.203 |
09 | 5.464 | 17.988 | 11.347 | 31.52 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.145 | 0.262 | -1.386 | 0.258 |
02 | -2.822 | -2.822 | -2.822 | 1.341 |
03 | 1.315 | -2.822 | -2.822 | -1.865 |
04 | 1.315 | -1.865 | -2.822 | -2.822 |
05 | -1.865 | -1.865 | -1.865 | 1.263 |
06 | -1.865 | -2.822 | -0.819 | 1.207 |
07 | 0.363 | -2.822 | 0.893 | -2.822 |
08 | -0.261 | 0.186 | 0.547 | -1.211 |
09 | -0.996 | 0.077 | -0.352 | 0.614 |