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Model info
Transcription factorPax3
ModelPAX3_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusnnbvdnWAATbdvddd
Best auROC (human)
Best auROC (mouse)0.817
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words447
TF familyPaired plus homeo domain {3.2.1}
TF subfamilyPAX-3/7 {3.2.1.1}
MGIMGI:97487
EntrezGeneGeneID:18505
(SSTAR profile)
UniProt IDPAX3_MOUSE
UniProt ACP24610
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.81816
0.0005 12.15701
0.0001 14.802510000000002
GTEx tissue expression atlas Pax3 expression
Motifs in JASPAR
MA0780.1 (PAX3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0115.044.034.013.069.026.025.023.012.027.031.012.015.021.065.013.0
0212.025.019.055.017.039.014.048.022.036.029.068.010.012.019.020.0
0325.016.013.07.052.011.030.019.030.020.017.014.023.015.0145.08.0
0423.017.068.022.030.014.09.09.049.026.082.048.06.03.035.04.0
0514.071.016.07.024.012.03.021.084.048.029.033.06.07.068.02.0
0657.01.010.060.013.05.08.0112.043.04.08.061.04.02.04.053.0
07113.03.01.00.011.00.00.01.028.00.01.01.0277.00.08.01.0
08425.00.03.01.03.00.00.00.08.02.00.00.03.00.00.00.0
0910.010.06.0413.00.00.00.02.00.00.00.03.00.00.00.01.0
100.03.06.01.01.01.01.07.01.01.01.03.05.093.0124.0197.0
111.00.05.01.055.08.021.014.056.019.037.020.016.015.0161.016.0
1240.012.073.03.025.07.03.07.0152.031.023.018.011.015.024.01.0
1330.011.014.0173.030.09.03.023.054.021.019.029.04.04.012.09.0
1454.07.016.041.013.011.02.019.022.06.09.011.012.016.019.0187.0
1560.05.011.025.021.08.04.07.016.010.011.09.0127.022.029.080.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.6060.4540.198-0.7450.901-0.066-0.105-0.187-0.823-0.0290.107-0.823-0.606-0.2770.841-0.745
02-0.823-0.105-0.3750.675-0.4840.334-0.6730.54-0.2310.2550.0410.886-0.999-0.823-0.375-0.324
03-0.105-0.543-0.745-1.340.619-0.9070.075-0.3750.075-0.324-0.484-0.673-0.187-0.6061.64-1.213
04-0.187-0.4840.886-0.2310.075-0.673-1.1-1.10.56-0.0661.0720.54-1.486-2.1210.227-1.862
05-0.6730.929-0.543-1.34-0.145-0.823-2.121-0.2771.0960.540.0410.169-1.486-1.340.886-2.472
060.711-3.016-0.9990.762-0.745-1.656-1.2131.3830.431-1.862-1.2130.778-1.862-2.472-1.8620.638
071.392-2.121-3.016-4.304-0.907-4.304-4.304-3.0160.007-4.304-3.016-3.0162.286-4.304-1.213-3.016
082.714-4.304-2.121-3.016-2.121-4.304-4.304-4.304-1.213-2.472-4.304-4.304-2.121-4.304-4.304-4.304
09-0.999-0.999-1.4862.685-4.304-4.304-4.304-2.472-4.304-4.304-4.304-2.121-4.304-4.304-4.304-3.016
10-4.304-2.121-1.486-3.016-3.016-3.016-3.016-1.34-3.016-3.016-3.016-2.121-1.6561.1981.4841.946
11-3.016-4.304-1.656-3.0160.675-1.213-0.277-0.6730.693-0.3750.282-0.324-0.543-0.6061.745-0.543
120.359-0.8230.957-2.121-0.105-1.34-2.121-1.341.6870.107-0.187-0.428-0.907-0.606-0.145-3.016
130.075-0.907-0.6731.8160.075-1.1-2.121-0.1870.657-0.277-0.3750.041-1.862-1.862-0.823-1.1
140.657-1.34-0.5430.384-0.745-0.907-2.472-0.375-0.231-1.486-1.1-0.907-0.823-0.543-0.3751.894
150.762-1.656-0.907-0.105-0.277-1.213-1.862-1.34-0.543-0.999-0.907-1.11.508-0.2310.0411.048