Model info
| Transcription factor | Pou2f2 | ||||||||
| Model | PO2F2_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dhATGCAWAKd | ||||||||
| Best auROC (human) | 0.919 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 14 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 501 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU2 (Oct-1/2-like factors) {3.1.10.2} | ||||||||
| MGI | MGI:101897 | ||||||||
| EntrezGene | GeneID:18987 (SSTAR profile) | ||||||||
| UniProt ID | PO2F2_MOUSE | ||||||||
| UniProt AC | Q00196 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Pou2f2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 214.0 | 76.0 | 106.0 | 104.0 |
| 02 | 61.0 | 199.0 | 35.0 | 205.0 |
| 03 | 451.0 | 32.0 | 13.0 | 4.0 |
| 04 | 8.0 | 9.0 | 21.0 | 462.0 |
| 05 | 4.0 | 2.0 | 482.0 | 12.0 |
| 06 | 38.0 | 412.0 | 17.0 | 33.0 |
| 07 | 478.0 | 5.0 | 3.0 | 14.0 |
| 08 | 295.0 | 37.0 | 43.0 | 125.0 |
| 09 | 457.0 | 13.0 | 25.0 | 5.0 |
| 10 | 42.0 | 49.0 | 61.0 | 348.0 |
| 11 | 98.0 | 76.0 | 199.0 | 127.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.533 | -0.49 | -0.163 | -0.181 |
| 02 | -0.705 | 0.46 | -1.242 | 0.49 |
| 03 | 1.274 | -1.328 | -2.163 | -3.126 |
| 04 | -2.584 | -2.484 | -1.725 | 1.298 |
| 05 | -3.126 | -3.573 | 1.34 | -2.234 |
| 06 | -1.163 | 1.184 | -1.92 | -1.298 |
| 07 | 1.332 | -2.961 | -3.325 | -2.096 |
| 08 | 0.852 | -1.189 | -1.044 | 0.0 |
| 09 | 1.287 | -2.163 | -1.561 | -2.961 |
| 10 | -1.067 | -0.918 | -0.705 | 1.016 |
| 11 | -0.24 | -0.49 | 0.46 | 0.016 |