Model info
| Transcription factor | Sp7 | ||||||||
| Model | SP7_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vhAvSMYRYMATTW | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.976 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 19 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Sp1-like factors {2.3.1.1} | ||||||||
| MGI | MGI:2153568 | ||||||||
| EntrezGene | GeneID:170574 (SSTAR profile) | ||||||||
| UniProt ID | SP7_MOUSE | ||||||||
| UniProt AC | Q8VI67 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Sp7 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 160.0 | 177.0 | 123.0 | 40.0 |
| 02 | 242.0 | 83.0 | 49.0 | 126.0 |
| 03 | 393.0 | 9.0 | 80.0 | 18.0 |
| 04 | 212.0 | 181.0 | 96.0 | 11.0 |
| 05 | 30.0 | 369.0 | 70.0 | 31.0 |
| 06 | 91.0 | 354.0 | 18.0 | 37.0 |
| 07 | 41.0 | 50.0 | 17.0 | 392.0 |
| 08 | 212.0 | 42.0 | 229.0 | 17.0 |
| 09 | 6.0 | 84.0 | 27.0 | 383.0 |
| 10 | 346.0 | 84.0 | 24.0 | 46.0 |
| 11 | 452.0 | 32.0 | 5.0 | 11.0 |
| 12 | 3.0 | 1.0 | 4.0 | 492.0 |
| 13 | 2.0 | 64.0 | 2.0 | 432.0 |
| 14 | 298.0 | 14.0 | 8.0 | 180.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.244 | 0.344 | -0.016 | -1.114 |
| 02 | 0.655 | -0.403 | -0.918 | 0.008 |
| 03 | 1.137 | -2.484 | -0.439 | -1.868 |
| 04 | 0.523 | 0.366 | -0.26 | -2.311 |
| 05 | -1.389 | 1.074 | -0.57 | -1.358 |
| 06 | -0.313 | 1.033 | -1.868 | -1.189 |
| 07 | -1.09 | -0.898 | -1.92 | 1.135 |
| 08 | 0.523 | -1.067 | 0.6 | -1.92 |
| 09 | -2.819 | -0.392 | -1.489 | 1.111 |
| 10 | 1.01 | -0.392 | -1.6 | -0.979 |
| 11 | 1.276 | -1.328 | -2.961 | -2.311 |
| 12 | -3.325 | -3.903 | -3.126 | 1.361 |
| 13 | -3.573 | -0.658 | -3.573 | 1.231 |
| 14 | 0.862 | -2.096 | -2.584 | 0.361 |