Transcription factor | Stat1 | ||||||||
Model | STAT1_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 24 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndRRRAAhhGAAASWvRWdvnvdn | ||||||||
Best auROC (human) | 0.988 | ||||||||
Best auROC (mouse) | 0.966 | ||||||||
Peak sets in benchmark (human) | 37 | ||||||||
Peak sets in benchmark (mouse) | 128 | ||||||||
Aligned words | 506 | ||||||||
TF family | STAT factors {6.2.1} | ||||||||
TF subfamily | STAT1 {6.2.1.0.1} | ||||||||
MGI | MGI:103063 | ||||||||
EntrezGene | |||||||||
UniProt ID | STAT1_MOUSE | ||||||||
UniProt AC | P42225 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Stat1 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 90.0 | 23.0 | 56.0 | 15.0 | 58.0 | 10.0 | 10.0 | 24.0 | 51.0 | 13.0 | 31.0 | 10.0 | 36.0 | 11.0 | 48.0 | 13.0 |
02 | 93.0 | 17.0 | 112.0 | 13.0 | 39.0 | 7.0 | 7.0 | 4.0 | 61.0 | 11.0 | 69.0 | 4.0 | 28.0 | 5.0 | 22.0 | 7.0 |
03 | 62.0 | 1.0 | 147.0 | 11.0 | 25.0 | 3.0 | 7.0 | 5.0 | 69.0 | 2.0 | 131.0 | 8.0 | 11.0 | 0.0 | 17.0 | 0.0 |
04 | 73.0 | 3.0 | 82.0 | 9.0 | 5.0 | 0.0 | 1.0 | 0.0 | 236.0 | 1.0 | 63.0 | 2.0 | 11.0 | 0.0 | 13.0 | 0.0 |
05 | 321.0 | 1.0 | 3.0 | 0.0 | 3.0 | 0.0 | 0.0 | 1.0 | 151.0 | 5.0 | 1.0 | 2.0 | 10.0 | 0.0 | 1.0 | 0.0 |
06 | 450.0 | 11.0 | 15.0 | 9.0 | 6.0 | 0.0 | 0.0 | 0.0 | 3.0 | 2.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 |
07 | 218.0 | 107.0 | 33.0 | 104.0 | 8.0 | 2.0 | 1.0 | 2.0 | 3.0 | 5.0 | 5.0 | 2.0 | 4.0 | 3.0 | 1.0 | 1.0 |
08 | 51.0 | 64.0 | 28.0 | 90.0 | 46.0 | 10.0 | 4.0 | 57.0 | 11.0 | 5.0 | 3.0 | 21.0 | 35.0 | 24.0 | 23.0 | 27.0 |
09 | 6.0 | 1.0 | 135.0 | 1.0 | 29.0 | 1.0 | 69.0 | 4.0 | 14.0 | 1.0 | 42.0 | 1.0 | 8.0 | 3.0 | 184.0 | 0.0 |
10 | 49.0 | 0.0 | 8.0 | 0.0 | 6.0 | 0.0 | 0.0 | 0.0 | 409.0 | 4.0 | 9.0 | 8.0 | 6.0 | 0.0 | 0.0 | 0.0 |
11 | 456.0 | 9.0 | 2.0 | 3.0 | 4.0 | 0.0 | 0.0 | 0.0 | 16.0 | 0.0 | 1.0 | 0.0 | 4.0 | 1.0 | 2.0 | 1.0 |
12 | 471.0 | 0.0 | 3.0 | 6.0 | 8.0 | 0.0 | 0.0 | 2.0 | 3.0 | 1.0 | 0.0 | 1.0 | 4.0 | 0.0 | 0.0 | 0.0 |
13 | 62.0 | 291.0 | 126.0 | 7.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 5.0 | 3.0 | 1.0 | 0.0 |
14 | 9.0 | 6.0 | 5.0 | 48.0 | 58.0 | 44.0 | 5.0 | 189.0 | 23.0 | 26.0 | 3.0 | 76.0 | 1.0 | 2.0 | 0.0 | 4.0 |
15 | 22.0 | 14.0 | 51.0 | 4.0 | 29.0 | 10.0 | 18.0 | 21.0 | 5.0 | 3.0 | 4.0 | 1.0 | 59.0 | 55.0 | 161.0 | 42.0 |
16 | 83.0 | 7.0 | 15.0 | 10.0 | 61.0 | 3.0 | 4.0 | 14.0 | 173.0 | 8.0 | 33.0 | 20.0 | 47.0 | 6.0 | 4.0 | 11.0 |
17 | 250.0 | 19.0 | 42.0 | 53.0 | 12.0 | 5.0 | 1.0 | 6.0 | 32.0 | 6.0 | 9.0 | 9.0 | 15.0 | 12.0 | 16.0 | 12.0 |
18 | 194.0 | 28.0 | 67.0 | 20.0 | 18.0 | 9.0 | 3.0 | 12.0 | 37.0 | 6.0 | 8.0 | 17.0 | 20.0 | 4.0 | 42.0 | 14.0 |
19 | 43.0 | 109.0 | 105.0 | 12.0 | 10.0 | 13.0 | 6.0 | 18.0 | 33.0 | 19.0 | 49.0 | 19.0 | 10.0 | 21.0 | 18.0 | 14.0 |
20 | 44.0 | 13.0 | 24.0 | 15.0 | 44.0 | 54.0 | 9.0 | 55.0 | 74.0 | 37.0 | 26.0 | 41.0 | 9.0 | 21.0 | 13.0 | 20.0 |
21 | 85.0 | 34.0 | 35.0 | 17.0 | 55.0 | 24.0 | 10.0 | 36.0 | 27.0 | 13.0 | 16.0 | 16.0 | 35.0 | 27.0 | 43.0 | 26.0 |
22 | 118.0 | 19.0 | 46.0 | 19.0 | 50.0 | 18.0 | 10.0 | 20.0 | 52.0 | 11.0 | 27.0 | 14.0 | 32.0 | 21.0 | 20.0 | 22.0 |
23 | 116.0 | 23.0 | 78.0 | 35.0 | 21.0 | 18.0 | 5.0 | 25.0 | 27.0 | 28.0 | 32.0 | 16.0 | 16.0 | 15.0 | 28.0 | 16.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 1.052 | -0.3 | 0.58 | -0.719 | 0.615 | -1.112 | -1.112 | -0.258 | 0.487 | -0.858 | -0.006 | -1.112 | 0.142 | -1.02 | 0.427 | -0.858 |
02 | 1.084 | -0.597 | 1.27 | -0.858 | 0.221 | -1.452 | -1.452 | -1.973 | 0.665 | -1.02 | 0.787 | -1.973 | -0.106 | -1.768 | -0.344 | -1.452 |
03 | 0.681 | -3.124 | 1.541 | -1.02 | -0.218 | -2.232 | -1.452 | -1.768 | 0.787 | -2.582 | 1.426 | -1.326 | -1.02 | -4.398 | -0.597 | -4.398 |
04 | 0.843 | -2.232 | 0.959 | -1.213 | -1.768 | -4.398 | -3.124 | -4.398 | 2.013 | -3.124 | 0.697 | -2.582 | -1.02 | -4.398 | -0.858 | -4.398 |
05 | 2.32 | -3.124 | -2.232 | -4.398 | -2.232 | -4.398 | -4.398 | -3.124 | 1.567 | -1.768 | -3.124 | -2.582 | -1.112 | -4.398 | -3.124 | -4.398 |
06 | 2.658 | -1.02 | -0.719 | -1.213 | -1.598 | -4.398 | -4.398 | -4.398 | -2.232 | -2.582 | -4.398 | -4.398 | -2.232 | -4.398 | -4.398 | -4.398 |
07 | 1.934 | 1.224 | 0.056 | 1.196 | -1.326 | -2.582 | -3.124 | -2.582 | -2.232 | -1.768 | -1.768 | -2.582 | -1.973 | -2.232 | -3.124 | -3.124 |
08 | 0.487 | 0.713 | -0.106 | 1.052 | 0.385 | -1.112 | -1.973 | 0.597 | -1.02 | -1.768 | -2.232 | -0.39 | 0.114 | -0.258 | -0.3 | -0.142 |
09 | -1.598 | -3.124 | 1.456 | -3.124 | -0.072 | -3.124 | 0.787 | -1.973 | -0.786 | -3.124 | 0.294 | -3.124 | -1.326 | -2.232 | 1.765 | -4.398 |
10 | 0.447 | -4.398 | -1.326 | -4.398 | -1.598 | -4.398 | -4.398 | -4.398 | 2.562 | -1.973 | -1.213 | -1.326 | -1.598 | -4.398 | -4.398 | -4.398 |
11 | 2.671 | -1.213 | -2.582 | -2.232 | -1.973 | -4.398 | -4.398 | -4.398 | -0.656 | -4.398 | -3.124 | -4.398 | -1.973 | -3.124 | -2.582 | -3.124 |
12 | 2.703 | -4.398 | -2.232 | -1.598 | -1.326 | -4.398 | -4.398 | -2.582 | -2.232 | -3.124 | -4.398 | -3.124 | -1.973 | -4.398 | -4.398 | -4.398 |
13 | 0.681 | 2.222 | 1.387 | -1.452 | -4.398 | -3.124 | -4.398 | -4.398 | -3.124 | -3.124 | -3.124 | -4.398 | -1.768 | -2.232 | -3.124 | -4.398 |
14 | -1.213 | -1.598 | -1.768 | 0.427 | 0.615 | 0.341 | -1.768 | 1.791 | -0.3 | -0.179 | -2.232 | 0.883 | -3.124 | -2.582 | -4.398 | -1.973 |
15 | -0.344 | -0.786 | 0.487 | -1.973 | -0.072 | -1.112 | -0.541 | -0.39 | -1.768 | -2.232 | -1.973 | -3.124 | 0.632 | 0.562 | 1.631 | 0.294 |
16 | 0.971 | -1.452 | -0.719 | -1.112 | 0.665 | -2.232 | -1.973 | -0.786 | 1.703 | -1.326 | 0.056 | -0.437 | 0.406 | -1.598 | -1.973 | -1.02 |
17 | 2.071 | -0.488 | 0.294 | 0.525 | -0.936 | -1.768 | -3.124 | -1.598 | 0.025 | -1.598 | -1.213 | -1.213 | -0.719 | -0.936 | -0.656 | -0.936 |
18 | 1.817 | -0.106 | 0.758 | -0.437 | -0.541 | -1.213 | -2.232 | -0.936 | 0.169 | -1.598 | -1.326 | -0.597 | -0.437 | -1.973 | 0.294 | -0.786 |
19 | 0.318 | 1.243 | 1.205 | -0.936 | -1.112 | -0.858 | -1.598 | -0.541 | 0.056 | -0.488 | 0.447 | -0.488 | -1.112 | -0.39 | -0.541 | -0.786 |
20 | 0.341 | -0.858 | -0.258 | -0.719 | 0.341 | 0.544 | -1.213 | 0.562 | 0.857 | 0.169 | -0.179 | 0.271 | -1.213 | -0.39 | -0.858 | -0.437 |
21 | 0.995 | 0.085 | 0.114 | -0.597 | 0.562 | -0.258 | -1.112 | 0.142 | -0.142 | -0.858 | -0.656 | -0.656 | 0.114 | -0.142 | 0.318 | -0.179 |
22 | 1.322 | -0.488 | 0.385 | -0.488 | 0.467 | -0.541 | -1.112 | -0.437 | 0.506 | -1.02 | -0.142 | -0.786 | 0.025 | -0.39 | -0.437 | -0.344 |
23 | 1.305 | -0.3 | 0.909 | 0.114 | -0.39 | -0.541 | -1.768 | -0.218 | -0.142 | -0.106 | 0.025 | -0.656 | -0.656 | -0.719 | -0.106 | -0.656 |