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Model info
Transcription factorTcf7
ModelTCF7_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnvvvASWWSAAARvn
Best auROC (human)0.858
Best auROC (mouse)0.944
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)19
Aligned words499
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7 (TCF-1) [1] {4.1.3.0.1}
MGIMGI:98507
EntrezGeneGeneID:21414
(SSTAR profile)
UniProt IDTCF7_MOUSE
UniProt ACQ00417
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.238610000000001
0.0005 12.82526
0.0001 15.97746
GTEx tissue expression atlas Tcf7 expression
Motifs in JASPAR
MA0769.1 (Tcf7; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0177.036.041.06.054.027.023.010.048.043.028.07.026.025.027.020.0
0251.094.047.013.039.052.021.019.025.048.035.011.010.014.014.05.0
0346.034.038.07.023.0152.028.05.038.042.034.03.012.015.018.03.0
0493.02.011.013.0209.03.014.017.086.02.022.08.011.01.04.02.0
0511.0262.0120.06.00.07.01.00.00.021.029.01.01.028.09.02.0
069.02.00.01.0214.06.05.093.0130.03.03.023.05.00.00.04.0
0782.010.059.0207.01.00.05.05.02.01.02.03.021.00.016.084.0
0810.060.036.00.00.09.02.00.016.030.035.01.036.0194.061.08.0
0959.01.00.02.0278.00.02.013.0127.03.01.03.09.00.00.00.0
10420.013.039.01.01.00.03.00.01.00.02.00.011.00.07.00.0
11388.01.027.017.012.00.01.00.047.01.01.02.00.00.01.00.0
1268.051.0300.028.01.00.01.00.04.03.022.01.03.06.09.01.0
139.022.043.02.032.018.09.01.078.074.0156.024.05.05.014.06.0
1433.020.062.09.052.028.020.019.050.079.061.032.010.012.09.02.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.8980.1440.273-1.5960.546-0.14-0.298-1.110.4290.32-0.104-1.451-0.177-0.216-0.14-0.435
020.4891.0970.408-0.8560.2230.508-0.388-0.486-0.2160.4290.116-1.018-1.11-0.784-0.784-1.766
030.3870.0870.197-1.451-0.2981.576-0.104-1.7660.1970.2960.087-2.23-0.934-0.717-0.539-2.23
041.086-2.58-1.018-0.8561.894-2.23-0.784-0.5951.008-2.58-0.342-1.324-1.018-3.122-1.971-2.58
05-1.0182.1191.34-1.596-4.397-1.451-3.122-4.397-4.397-0.388-0.07-3.122-3.122-0.104-1.211-2.58
06-1.211-2.58-4.397-3.1221.917-1.596-1.7661.0861.42-2.23-2.23-0.298-1.766-4.397-4.397-1.971
070.961-1.110.6341.884-3.122-4.397-1.766-1.766-2.58-3.122-2.58-2.23-0.388-4.397-0.6540.985
08-1.110.650.144-4.397-4.397-1.211-2.58-4.397-0.654-0.0360.116-3.1220.1441.8190.667-1.324
090.634-3.122-4.397-2.582.179-4.397-2.58-0.8561.397-2.23-3.122-2.23-1.211-4.397-4.397-4.397
102.591-0.8560.223-3.122-3.122-4.397-2.23-4.397-3.122-4.397-2.58-4.397-1.018-4.397-1.451-4.397
112.512-3.122-0.14-0.595-0.934-4.397-3.122-4.3970.408-3.122-3.122-2.58-4.397-4.397-3.122-4.397
120.7750.4892.255-0.104-3.122-4.397-3.122-4.397-1.971-2.23-0.342-3.122-2.23-1.596-1.211-3.122
13-1.211-0.3420.32-2.580.027-0.539-1.211-3.1220.9110.8591.602-0.256-1.766-1.766-0.784-1.596
140.058-0.4350.683-1.2110.508-0.104-0.435-0.4860.4690.9240.6670.027-1.11-0.934-1.211-2.58