Transcription factor | Tead4 | ||||||||
Model | TEAD4_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 18 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nRMATTCCWvdvMKdbbh | ||||||||
Best auROC (human) | 0.964 | ||||||||
Best auROC (mouse) | 0.955 | ||||||||
Peak sets in benchmark (human) | 57 | ||||||||
Peak sets in benchmark (mouse) | 10 | ||||||||
Aligned words | 491 | ||||||||
TF family | TEF-1-related factors {3.6.1} | ||||||||
TF subfamily | TEF-3 (TEAD-4, TCF-13L1, Tefr1) {3.6.1.0.2} | ||||||||
MGI | MGI:106907 | ||||||||
EntrezGene | GeneID:21679 (SSTAR profile) | ||||||||
UniProt ID | TEAD4_MOUSE | ||||||||
UniProt AC | Q62296 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Tead4 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 62.0 | 2.0 | 48.0 | 1.0 | 124.0 | 2.0 | 17.0 | 9.0 | 67.0 | 2.0 | 39.0 | 4.0 | 35.0 | 3.0 | 65.0 | 6.0 |
02 | 70.0 | 186.0 | 31.0 | 1.0 | 2.0 | 7.0 | 0.0 | 0.0 | 37.0 | 113.0 | 19.0 | 0.0 | 1.0 | 18.0 | 1.0 | 0.0 |
03 | 108.0 | 1.0 | 1.0 | 0.0 | 323.0 | 1.0 | 0.0 | 0.0 | 48.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
04 | 0.0 | 1.0 | 7.0 | 472.0 | 0.0 | 0.0 | 1.0 | 2.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 1.0 |
05 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 6.0 | 60.0 | 3.0 | 36.0 | 378.0 |
06 | 4.0 | 35.0 | 12.0 | 9.0 | 0.0 | 2.0 | 0.0 | 1.0 | 0.0 | 31.0 | 2.0 | 5.0 | 0.0 | 345.0 | 10.0 | 30.0 |
07 | 1.0 | 1.0 | 0.0 | 2.0 | 7.0 | 310.0 | 0.0 | 96.0 | 2.0 | 13.0 | 0.0 | 9.0 | 0.0 | 25.0 | 0.0 | 20.0 |
08 | 0.0 | 4.0 | 0.0 | 6.0 | 127.0 | 23.0 | 9.0 | 190.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 19.0 | 3.0 | 105.0 |
09 | 26.0 | 17.0 | 68.0 | 16.0 | 14.0 | 15.0 | 3.0 | 14.0 | 3.0 | 1.0 | 8.0 | 0.0 | 48.0 | 62.0 | 142.0 | 49.0 |
10 | 29.0 | 3.0 | 52.0 | 7.0 | 52.0 | 4.0 | 17.0 | 22.0 | 64.0 | 23.0 | 116.0 | 18.0 | 20.0 | 6.0 | 41.0 | 12.0 |
11 | 50.0 | 71.0 | 42.0 | 2.0 | 11.0 | 21.0 | 1.0 | 3.0 | 66.0 | 93.0 | 65.0 | 2.0 | 11.0 | 33.0 | 13.0 | 2.0 |
12 | 97.0 | 7.0 | 20.0 | 14.0 | 167.0 | 23.0 | 10.0 | 18.0 | 72.0 | 23.0 | 14.0 | 12.0 | 3.0 | 3.0 | 1.0 | 2.0 |
13 | 12.0 | 5.0 | 25.0 | 297.0 | 8.0 | 16.0 | 3.0 | 29.0 | 6.0 | 8.0 | 11.0 | 20.0 | 3.0 | 6.0 | 14.0 | 23.0 |
14 | 5.0 | 2.0 | 12.0 | 10.0 | 11.0 | 5.0 | 6.0 | 13.0 | 16.0 | 5.0 | 11.0 | 21.0 | 61.0 | 19.0 | 68.0 | 221.0 |
15 | 19.0 | 32.0 | 23.0 | 19.0 | 3.0 | 14.0 | 5.0 | 9.0 | 8.0 | 51.0 | 15.0 | 23.0 | 7.0 | 177.0 | 28.0 | 53.0 |
16 | 3.0 | 13.0 | 8.0 | 13.0 | 22.0 | 146.0 | 12.0 | 94.0 | 7.0 | 23.0 | 14.0 | 27.0 | 9.0 | 33.0 | 25.0 | 37.0 |
17 | 7.0 | 11.0 | 14.0 | 9.0 | 67.0 | 34.0 | 5.0 | 109.0 | 7.0 | 12.0 | 20.0 | 20.0 | 14.0 | 39.0 | 37.0 | 81.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.707 | -2.556 | 0.453 | -3.099 | 1.397 | -2.556 | -0.571 | -1.187 | 0.784 | -2.556 | 0.247 | -1.948 | 0.14 | -2.206 | 0.754 | -1.572 |
02 | 0.828 | 1.802 | 0.02 | -3.099 | -2.556 | -1.427 | -4.377 | -4.377 | 0.195 | 1.305 | -0.462 | -4.377 | -3.099 | -0.515 | -3.099 | -4.377 |
03 | 1.259 | -3.099 | -3.099 | -4.377 | 2.353 | -3.099 | -4.377 | -4.377 | 0.453 | -3.099 | -3.099 | -3.099 | -3.099 | -4.377 | -4.377 | -4.377 |
04 | -4.377 | -3.099 | -1.427 | 2.732 | -4.377 | -4.377 | -3.099 | -2.556 | -4.377 | -4.377 | -4.377 | -2.556 | -4.377 | -4.377 | -4.377 | -3.099 |
05 | -4.377 | -4.377 | -4.377 | -4.377 | -4.377 | -4.377 | -4.377 | -3.099 | -4.377 | -4.377 | -2.556 | -1.572 | 0.674 | -2.206 | 0.168 | 2.51 |
06 | -1.948 | 0.14 | -0.91 | -1.187 | -4.377 | -2.556 | -4.377 | -3.099 | -4.377 | 0.02 | -2.556 | -1.742 | -4.377 | 2.418 | -1.086 | -0.012 |
07 | -3.099 | -3.099 | -4.377 | -2.556 | -1.427 | 2.312 | -4.377 | 1.142 | -2.556 | -0.832 | -4.377 | -1.187 | -4.377 | -0.192 | -4.377 | -0.411 |
08 | -4.377 | -1.948 | -4.377 | -1.572 | 1.421 | -0.274 | -1.187 | 1.823 | -4.377 | -4.377 | -4.377 | -4.377 | -4.377 | -0.462 | -2.206 | 1.231 |
09 | -0.153 | -0.571 | 0.799 | -0.63 | -0.76 | -0.693 | -2.206 | -0.76 | -2.206 | -3.099 | -1.3 | -4.377 | 0.453 | 0.707 | 1.532 | 0.473 |
10 | -0.046 | -2.206 | 0.532 | -1.427 | 0.532 | -1.948 | -0.571 | -0.318 | 0.739 | -0.274 | 1.331 | -0.515 | -0.411 | -1.572 | 0.297 | -0.91 |
11 | 0.493 | 0.842 | 0.321 | -2.556 | -0.994 | -0.364 | -3.099 | -2.206 | 0.769 | 1.11 | 0.754 | -2.556 | -0.994 | 0.082 | -0.832 | -2.556 |
12 | 1.152 | -1.427 | -0.411 | -0.76 | 1.694 | -0.274 | -1.086 | -0.515 | 0.856 | -0.274 | -0.76 | -0.91 | -2.206 | -2.206 | -3.099 | -2.556 |
13 | -0.91 | -1.742 | -0.192 | 2.269 | -1.3 | -0.63 | -2.206 | -0.046 | -1.572 | -1.3 | -0.994 | -0.411 | -2.206 | -1.572 | -0.76 | -0.274 |
14 | -1.742 | -2.556 | -0.91 | -1.086 | -0.994 | -1.742 | -1.572 | -0.832 | -0.63 | -1.742 | -0.994 | -0.364 | 0.691 | -0.462 | 0.799 | 1.974 |
15 | -0.462 | 0.051 | -0.274 | -0.462 | -2.206 | -0.76 | -1.742 | -1.187 | -1.3 | 0.513 | -0.693 | -0.274 | -1.427 | 1.752 | -0.08 | 0.551 |
16 | -2.206 | -0.832 | -1.3 | -0.832 | -0.318 | 1.56 | -0.91 | 1.121 | -1.427 | -0.274 | -0.76 | -0.116 | -1.187 | 0.082 | -0.192 | 0.195 |
17 | -1.427 | -0.994 | -0.76 | -1.187 | 0.784 | 0.111 | -1.742 | 1.269 | -1.427 | -0.91 | -0.411 | -0.411 | -0.76 | 0.247 | 0.195 | 0.973 |