Model info
| Transcription factor | Yy1 | ||||||||
| Model | TYY1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vAAvATGGCSSM | ||||||||
| Best auROC (human) | 0.984 | ||||||||
| Best auROC (mouse) | 0.993 | ||||||||
| Peak sets in benchmark (human) | 69 | ||||||||
| Peak sets in benchmark (mouse) | 72 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | YY1-like factors {2.3.3.9} | ||||||||
| MGI | MGI:99150 | ||||||||
| EntrezGene | GeneID:22632 (SSTAR profile) | ||||||||
| UniProt ID | TYY1_MOUSE | ||||||||
| UniProt AC | Q00899 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Yy1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 89.0 | 285.0 | 66.0 | 60.0 |
| 02 | 420.0 | 8.0 | 66.0 | 6.0 |
| 03 | 421.0 | 18.0 | 18.0 | 43.0 |
| 04 | 176.0 | 106.0 | 205.0 | 13.0 |
| 05 | 497.0 | 2.0 | 0.0 | 1.0 |
| 06 | 2.0 | 1.0 | 2.0 | 495.0 |
| 07 | 3.0 | 0.0 | 496.0 | 1.0 |
| 08 | 2.0 | 1.0 | 495.0 | 2.0 |
| 09 | 20.0 | 460.0 | 3.0 | 17.0 |
| 10 | 15.0 | 82.0 | 340.0 | 63.0 |
| 11 | 40.0 | 53.0 | 376.0 | 31.0 |
| 12 | 68.0 | 364.0 | 31.0 | 37.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.335 | 0.817 | -0.628 | -0.721 |
| 02 | 1.203 | -2.584 | -0.628 | -2.819 |
| 03 | 1.206 | -1.868 | -1.868 | -1.044 |
| 04 | 0.339 | -0.163 | 0.49 | -2.163 |
| 05 | 1.371 | -3.573 | -4.4 | -3.903 |
| 06 | -3.573 | -3.903 | -3.573 | 1.367 |
| 07 | -3.325 | -4.4 | 1.369 | -3.903 |
| 08 | -3.573 | -3.903 | 1.367 | -3.573 |
| 09 | -1.77 | 1.294 | -3.325 | -1.92 |
| 10 | -2.034 | -0.415 | 0.993 | -0.673 |
| 11 | -1.114 | -0.841 | 1.093 | -1.358 |
| 12 | -0.599 | 1.061 | -1.358 | -1.189 |