Model info
| Transcription factor | WT1 (GeneCards) | ||||||||
| Model | WT1_HUMAN.H11MO.1.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | vdGGGAGKddv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.986 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 115 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:12796 | ||||||||
| EntrezGene | GeneID:7490 (SSTAR profile) | ||||||||
| UniProt ID | WT1_HUMAN | ||||||||
| UniProt AC | P19544 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | WT1 expression | ||||||||
| ReMap ChIP-seq dataset list | WT1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 15.0 | 22.0 | 66.0 | 12.0 |
| 02 | 33.0 | 5.0 | 23.0 | 54.0 |
| 03 | 6.0 | 2.0 | 103.0 | 4.0 |
| 04 | 3.0 | 0.0 | 111.0 | 1.0 |
| 05 | 0.0 | 0.0 | 115.0 | 0.0 |
| 06 | 109.0 | 0.0 | 0.0 | 6.0 |
| 07 | 5.0 | 0.0 | 109.0 | 1.0 |
| 08 | 9.0 | 7.0 | 71.0 | 28.0 |
| 09 | 67.0 | 12.0 | 17.0 | 19.0 |
| 10 | 26.0 | 9.0 | 55.0 | 25.0 |
| 11 | 25.0 | 28.0 | 55.0 | 7.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.615 | -0.256 | 0.808 | -0.82 |
| 02 | 0.133 | -1.577 | -0.213 | 0.612 |
| 03 | -1.427 | -2.24 | 1.247 | -1.753 |
| 04 | -1.967 | -3.228 | 1.321 | -2.617 |
| 05 | -3.228 | -3.228 | 1.356 | -3.228 |
| 06 | 1.303 | -3.228 | -3.228 | -1.427 |
| 07 | -1.577 | -3.228 | 1.303 | -2.617 |
| 08 | -1.078 | -1.297 | 0.88 | -0.025 |
| 09 | 0.823 | -0.82 | -0.498 | -0.394 |
| 10 | -0.096 | -1.078 | 0.63 | -0.134 |
| 11 | -0.134 | -0.025 | 0.63 | -1.297 |