Model info
| Transcription factor | ZNF354A (GeneCards) | ||||||||
| Model | Z354A_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 24 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dYYYhddYYhYTTMYWYYYRdTRW | ||||||||
| Best auROC (human) | 0.894 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 496 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF354A-like factors {2.3.3.64} | ||||||||
| HGNC | HGNC:11628 | ||||||||
| EntrezGene | GeneID:6940 (SSTAR profile) | ||||||||
| UniProt ID | Z354A_HUMAN | ||||||||
| UniProt AC | O60765 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF354A expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF354A datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 234.0 | 37.0 | 130.0 | 95.0 |
| 02 | 38.0 | 57.0 | 29.0 | 372.0 |
| 03 | 16.0 | 60.0 | 29.0 | 391.0 |
| 04 | 20.0 | 116.0 | 32.0 | 328.0 |
| 05 | 252.0 | 99.0 | 54.0 | 91.0 |
| 06 | 127.0 | 45.0 | 238.0 | 86.0 |
| 07 | 124.0 | 70.0 | 84.0 | 218.0 |
| 08 | 34.0 | 267.0 | 32.0 | 163.0 |
| 09 | 29.0 | 393.0 | 13.0 | 61.0 |
| 10 | 284.0 | 75.0 | 38.0 | 99.0 |
| 11 | 36.0 | 57.0 | 18.0 | 385.0 |
| 12 | 7.0 | 10.0 | 15.0 | 464.0 |
| 13 | 10.0 | 60.0 | 24.0 | 402.0 |
| 14 | 289.0 | 125.0 | 46.0 | 36.0 |
| 15 | 21.0 | 312.0 | 13.0 | 150.0 |
| 16 | 312.0 | 50.0 | 62.0 | 72.0 |
| 17 | 19.0 | 49.0 | 40.0 | 388.0 |
| 18 | 32.0 | 44.0 | 27.0 | 393.0 |
| 19 | 18.0 | 97.0 | 26.0 | 355.0 |
| 20 | 336.0 | 40.0 | 67.0 | 53.0 |
| 21 | 241.0 | 50.0 | 92.0 | 113.0 |
| 22 | 31.0 | 16.0 | 38.0 | 411.0 |
| 23 | 59.0 | 51.0 | 338.0 | 48.0 |
| 24 | 76.0 | 59.0 | 41.0 | 320.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.629 | -1.181 | 0.047 | -0.263 |
| 02 | -1.155 | -0.763 | -1.413 | 1.09 |
| 03 | -1.968 | -0.713 | -1.413 | 1.14 |
| 04 | -1.762 | -0.066 | -1.32 | 0.965 |
| 05 | 0.703 | -0.222 | -0.815 | -0.305 |
| 06 | 0.024 | -0.992 | 0.646 | -0.36 |
| 07 | 0.0 | -0.562 | -0.384 | 0.559 |
| 08 | -1.262 | 0.76 | -1.32 | 0.271 |
| 09 | -1.413 | 1.145 | -2.155 | -0.697 |
| 10 | 0.822 | -0.495 | -1.155 | -0.222 |
| 11 | -1.207 | -0.763 | -1.86 | 1.125 |
| 12 | -2.687 | -2.386 | -2.026 | 1.311 |
| 13 | -2.386 | -0.713 | -1.592 | 1.168 |
| 14 | 0.839 | 0.008 | -0.971 | -1.207 |
| 15 | -1.717 | 0.915 | -2.155 | 0.188 |
| 16 | 0.915 | -0.89 | -0.681 | -0.535 |
| 17 | -1.81 | -0.91 | -1.106 | 1.132 |
| 18 | -1.32 | -1.014 | -1.481 | 1.145 |
| 19 | -1.86 | -0.242 | -1.517 | 1.044 |
| 20 | 0.989 | -1.106 | -0.605 | -0.834 |
| 21 | 0.658 | -0.89 | -0.294 | -0.092 |
| 22 | -1.35 | -1.968 | -1.155 | 1.19 |
| 23 | -0.729 | -0.871 | 0.995 | -0.93 |
| 24 | -0.482 | -0.729 | -1.082 | 0.94 |