Model info
| Transcription factor | ZSCAN31 (GeneCards) | ||||||||
| Model | ZSC31_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 18 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dKSMGCRGGGCMdKdRdv | ||||||||
| Best auROC (human) | 0.802 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 407 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF24-like factors {2.3.3.10} | ||||||||
| HGNC | HGNC:14097 | ||||||||
| EntrezGene | GeneID:64288 (SSTAR profile) | ||||||||
| UniProt ID | ZSC31_HUMAN | ||||||||
| UniProt AC | Q96LW9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZSCAN31 expression | ||||||||
| ReMap ChIP-seq dataset list | ZSCAN31 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 115.0 | 22.0 | 212.0 | 58.0 |
| 02 | 25.0 | 22.0 | 253.0 | 107.0 |
| 03 | 36.0 | 306.0 | 40.0 | 25.0 |
| 04 | 265.0 | 61.0 | 24.0 | 57.0 |
| 05 | 29.0 | 16.0 | 350.0 | 12.0 |
| 06 | 19.0 | 364.0 | 13.0 | 11.0 |
| 07 | 288.0 | 17.0 | 79.0 | 23.0 |
| 08 | 10.0 | 6.0 | 386.0 | 5.0 |
| 09 | 20.0 | 11.0 | 351.0 | 25.0 |
| 10 | 43.0 | 9.0 | 344.0 | 11.0 |
| 11 | 21.0 | 368.0 | 13.0 | 5.0 |
| 12 | 271.0 | 55.0 | 37.0 | 44.0 |
| 13 | 122.0 | 38.0 | 193.0 | 54.0 |
| 14 | 28.0 | 37.0 | 103.0 | 239.0 |
| 15 | 65.0 | 48.0 | 97.0 | 197.0 |
| 16 | 274.0 | 47.0 | 63.0 | 23.0 |
| 17 | 47.0 | 38.0 | 109.0 | 213.0 |
| 18 | 152.0 | 43.0 | 179.0 | 33.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.121 | -1.48 | 0.726 | -0.551 |
| 02 | -1.36 | -1.48 | 0.902 | 0.05 |
| 03 | -1.013 | 1.091 | -0.911 | -1.36 |
| 04 | 0.948 | -0.502 | -1.398 | -0.568 |
| 05 | -1.219 | -1.775 | 1.225 | -2.034 |
| 06 | -1.617 | 1.264 | -1.963 | -2.111 |
| 07 | 1.031 | -1.719 | -0.249 | -1.438 |
| 08 | -2.195 | -2.622 | 1.323 | -2.765 |
| 09 | -1.569 | -2.111 | 1.228 | -1.36 |
| 10 | -0.842 | -2.286 | 1.208 | -2.111 |
| 11 | -1.524 | 1.275 | -1.963 | -2.765 |
| 12 | 0.97 | -0.603 | -0.986 | -0.819 |
| 13 | 0.179 | -0.961 | 0.633 | -0.621 |
| 14 | -1.253 | -0.986 | 0.012 | 0.846 |
| 15 | -0.44 | -0.735 | -0.047 | 0.654 |
| 16 | 0.981 | -0.756 | -0.47 | -1.438 |
| 17 | -0.756 | -0.961 | 0.068 | 0.731 |
| 18 | 0.397 | -0.842 | 0.559 | -1.096 |