Model info
| Transcription factor | BACH1 (GeneCards) | ||||||||
| Model | BACH1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | YGCTGAGTCMbbb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 502 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
| HGNC | HGNC:935 | ||||||||
| EntrezGene | GeneID:571 (SSTAR profile) | ||||||||
| UniProt ID | BACH1_HUMAN | ||||||||
| UniProt AC | O14867 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BACH1 expression | ||||||||
| ReMap ChIP-seq dataset list | BACH1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 31.407 | 84.083 | 48.757 | 335.753 |
| 02 | 4.579 | 33.194 | 461.235 | 0.991 |
| 03 | 10.434 | 483.835 | 1.963 | 3.769 |
| 04 | 18.088 | 39.775 | 40.053 | 402.085 |
| 05 | 1.925 | 30.659 | 445.508 | 21.908 |
| 06 | 401.466 | 10.287 | 62.249 | 25.999 |
| 07 | 6.632 | 107.429 | 381.663 | 4.276 |
| 08 | 3.1 | 18.068 | 72.928 | 405.903 |
| 09 | 8.097 | 471.915 | 17.137 | 2.851 |
| 10 | 393.194 | 47.903 | 41.21 | 17.692 |
| 11 | 4.89 | 167.139 | 128.303 | 199.667 |
| 12 | 75.804 | 132.779 | 197.361 | 94.056 |
| 13 | 52.618 | 189.295 | 186.313 | 71.775 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.345 | -0.391 | -0.922 | 0.98 |
| 02 | -3.027 | -1.293 | 1.297 | -3.907 |
| 03 | -2.357 | 1.344 | -3.583 | -3.169 |
| 04 | -1.863 | -1.119 | -1.112 | 1.16 |
| 05 | -3.594 | -1.368 | 1.262 | -1.685 |
| 06 | 1.158 | -2.369 | -0.685 | -1.525 |
| 07 | -2.738 | -0.149 | 1.108 | -3.078 |
| 08 | -3.303 | -1.864 | -0.53 | 1.169 |
| 09 | -2.574 | 1.319 | -1.913 | -3.358 |
| 10 | 1.138 | -0.94 | -1.085 | -1.883 |
| 11 | -2.978 | 0.287 | 0.026 | 0.464 |
| 12 | -0.492 | 0.06 | 0.452 | -0.28 |
| 13 | -0.849 | 0.411 | 0.395 | -0.546 |