Model info
| Transcription factor | EHF (GeneCards) | ||||||||
| Model | EHF_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ndAbSAGGAAGYdvv | ||||||||
| Best auROC (human) | 0.966 | ||||||||
| Best auROC (mouse) | 0.654 | ||||||||
| Peak sets in benchmark (human) | 5 | ||||||||
| Peak sets in benchmark (mouse) | 3 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | EHF-like factors {3.5.2.4} | ||||||||
| HGNC | HGNC:3246 | ||||||||
| EntrezGene | GeneID:26298 (SSTAR profile) | ||||||||
| UniProt ID | EHF_HUMAN | ||||||||
| UniProt AC | Q9NZC4 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | EHF expression | ||||||||
| ReMap ChIP-seq dataset list | EHF datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 125.0 | 104.0 | 192.0 | 79.0 |
| 02 | 223.0 | 78.0 | 83.0 | 116.0 |
| 03 | 422.0 | 3.0 | 4.0 | 71.0 |
| 04 | 71.0 | 225.0 | 96.0 | 108.0 |
| 05 | 97.0 | 256.0 | 147.0 | 0.0 |
| 06 | 377.0 | 114.0 | 9.0 | 0.0 |
| 07 | 0.0 | 0.0 | 500.0 | 0.0 |
| 08 | 1.0 | 0.0 | 499.0 | 0.0 |
| 09 | 499.0 | 0.0 | 1.0 | 0.0 |
| 10 | 499.0 | 0.0 | 0.0 | 1.0 |
| 11 | 113.0 | 4.0 | 383.0 | 0.0 |
| 12 | 16.0 | 92.0 | 21.0 | 371.0 |
| 13 | 135.0 | 51.0 | 203.0 | 111.0 |
| 14 | 125.0 | 123.0 | 204.0 | 48.0 |
| 15 | 84.0 | 180.0 | 177.0 | 59.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.0 | -0.181 | 0.425 | -0.452 |
| 02 | 0.573 | -0.464 | -0.403 | -0.074 |
| 03 | 1.208 | -3.325 | -3.126 | -0.556 |
| 04 | -0.556 | 0.582 | -0.26 | -0.144 |
| 05 | -0.25 | 0.711 | 0.16 | -4.4 |
| 06 | 1.096 | -0.091 | -2.484 | -4.4 |
| 07 | -4.4 | -4.4 | 1.377 | -4.4 |
| 08 | -3.903 | -4.4 | 1.375 | -4.4 |
| 09 | 1.375 | -4.4 | -3.903 | -4.4 |
| 10 | 1.375 | -4.4 | -4.4 | -3.903 |
| 11 | -0.1 | -3.126 | 1.111 | -4.4 |
| 12 | -1.975 | -0.302 | -1.725 | 1.08 |
| 13 | 0.076 | -0.879 | 0.48 | -0.117 |
| 14 | 0.0 | -0.016 | 0.485 | -0.938 |
| 15 | -0.392 | 0.361 | 0.344 | -0.737 |