Model info
| Transcription factor | FEV (GeneCards) | ||||||||
| Model | FEV_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvRGARRhS | ||||||||
| Best auROC (human) | 0.753 | ||||||||
| Best auROC (mouse) | 0.887 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 498 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| HGNC | HGNC:18562 | ||||||||
| EntrezGene | GeneID:54738 (SSTAR profile) | ||||||||
| UniProt ID | FEV_HUMAN | ||||||||
| UniProt AC | Q99581 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FEV expression | ||||||||
| ReMap ChIP-seq dataset list | FEV datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 112.0 | 102.0 | 259.0 | 25.0 |
| 02 | 127.0 | 264.0 | 67.0 | 40.0 |
| 03 | 140.0 | 160.0 | 177.0 | 21.0 |
| 04 | 158.0 | 6.0 | 328.0 | 6.0 |
| 05 | 16.0 | 3.0 | 472.0 | 7.0 |
| 06 | 482.0 | 11.0 | 2.0 | 3.0 |
| 07 | 335.0 | 29.0 | 125.0 | 9.0 |
| 08 | 93.0 | 66.0 | 300.0 | 39.0 |
| 09 | 77.0 | 193.0 | 44.0 | 184.0 |
| 10 | 36.0 | 115.0 | 291.0 | 56.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.104 | -0.197 | 0.726 | -1.558 |
| 02 | 0.02 | 0.745 | -0.609 | -1.11 |
| 03 | 0.116 | 0.248 | 0.348 | -1.721 |
| 04 | 0.236 | -2.815 | 0.961 | -2.815 |
| 05 | -1.971 | -3.321 | 1.324 | -2.69 |
| 06 | 1.344 | -2.307 | -3.569 | -3.321 |
| 07 | 0.982 | -1.417 | 0.004 | -2.48 |
| 08 | -0.288 | -0.624 | 0.872 | -1.134 |
| 09 | -0.473 | 0.434 | -1.018 | 0.387 |
| 10 | -1.211 | -0.078 | 0.842 | -0.784 |